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Blood from ‘junk’: the LTR chimeric transcript Pu.2 promotes erythropoiesis
Transposable elements (TEs) are a prominent feature of most eukaryotic genomes. Despite rapidly accumulating evidence for the role of TE-driven insertional mutagenesis and structural variation in genome evolution, few clear examples of individual TEs impacting biology via perturbed gene regulation a...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4023170/ https://www.ncbi.nlm.nih.gov/pubmed/24839466 http://dx.doi.org/10.1186/1759-8753-5-15 |
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author | Upton, Kyle R Faulkner, Geoffrey J |
author_facet | Upton, Kyle R Faulkner, Geoffrey J |
author_sort | Upton, Kyle R |
collection | PubMed |
description | Transposable elements (TEs) are a prominent feature of most eukaryotic genomes. Despite rapidly accumulating evidence for the role of TE-driven insertional mutagenesis and structural variation in genome evolution, few clear examples of individual TEs impacting biology via perturbed gene regulation are available. A recent report describes the discovery of an alternative promoter for the murine erythroid transcription factor Pu.1. This promoter is located in an ORR1A0 long terminal repeat (LTR) retrotransposon intronic to Pu.1 and is regulated by the Krüppel-like factors KLF1 and KLF3. Expression of the resultant chimeric transcript, called Pu.2, spontaneously induces erythroid differentiation in vitro. These experiments illustrate how transcription factor binding sites spread by retrotransposition have the potential to impact networks encoding key biological processes in the host genome. |
format | Online Article Text |
id | pubmed-4023170 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-40231702014-05-17 Blood from ‘junk’: the LTR chimeric transcript Pu.2 promotes erythropoiesis Upton, Kyle R Faulkner, Geoffrey J Mob DNA Commentary Transposable elements (TEs) are a prominent feature of most eukaryotic genomes. Despite rapidly accumulating evidence for the role of TE-driven insertional mutagenesis and structural variation in genome evolution, few clear examples of individual TEs impacting biology via perturbed gene regulation are available. A recent report describes the discovery of an alternative promoter for the murine erythroid transcription factor Pu.1. This promoter is located in an ORR1A0 long terminal repeat (LTR) retrotransposon intronic to Pu.1 and is regulated by the Krüppel-like factors KLF1 and KLF3. Expression of the resultant chimeric transcript, called Pu.2, spontaneously induces erythroid differentiation in vitro. These experiments illustrate how transcription factor binding sites spread by retrotransposition have the potential to impact networks encoding key biological processes in the host genome. BioMed Central 2014-05-09 /pmc/articles/PMC4023170/ /pubmed/24839466 http://dx.doi.org/10.1186/1759-8753-5-15 Text en Copyright © 2014 Upton and Faulkner; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Commentary Upton, Kyle R Faulkner, Geoffrey J Blood from ‘junk’: the LTR chimeric transcript Pu.2 promotes erythropoiesis |
title | Blood from ‘junk’: the LTR chimeric transcript Pu.2 promotes erythropoiesis |
title_full | Blood from ‘junk’: the LTR chimeric transcript Pu.2 promotes erythropoiesis |
title_fullStr | Blood from ‘junk’: the LTR chimeric transcript Pu.2 promotes erythropoiesis |
title_full_unstemmed | Blood from ‘junk’: the LTR chimeric transcript Pu.2 promotes erythropoiesis |
title_short | Blood from ‘junk’: the LTR chimeric transcript Pu.2 promotes erythropoiesis |
title_sort | blood from ‘junk’: the ltr chimeric transcript pu.2 promotes erythropoiesis |
topic | Commentary |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4023170/ https://www.ncbi.nlm.nih.gov/pubmed/24839466 http://dx.doi.org/10.1186/1759-8753-5-15 |
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