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Non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible Archean ocean

The reaction sequences of central metabolism, glycolysis and the pentose phosphate pathway provide essential precursors for nucleic acids, amino acids and lipids. However, their evolutionary origins are not yet understood. Here, we provide evidence that their structure could have been fundamentally...

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Detalles Bibliográficos
Autores principales: Keller, Markus A, Turchyn, Alexandra V, Ralser, Markus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: European Molecular Biology Organization 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4023395/
https://www.ncbi.nlm.nih.gov/pubmed/24771084
http://dx.doi.org/10.1002/msb.20145228
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author Keller, Markus A
Turchyn, Alexandra V
Ralser, Markus
author_facet Keller, Markus A
Turchyn, Alexandra V
Ralser, Markus
author_sort Keller, Markus A
collection PubMed
description The reaction sequences of central metabolism, glycolysis and the pentose phosphate pathway provide essential precursors for nucleic acids, amino acids and lipids. However, their evolutionary origins are not yet understood. Here, we provide evidence that their structure could have been fundamentally shaped by the general chemical environments in earth's earliest oceans. We reconstructed potential scenarios for oceans of the prebiotic Archean based on the composition of early sediments. We report that the resultant reaction milieu catalyses the interconversion of metabolites that in modern organisms constitute glycolysis and the pentose phosphate pathway. The 29 observed reactions include the formation and/or interconversion of glucose, pyruvate, the nucleic acid precursor ribose‐5‐phosphate and the amino acid precursor erythrose‐4‐phosphate, antedating reactions sequences similar to that used by the metabolic pathways. Moreover, the Archean ocean mimetic increased the stability of the phosphorylated intermediates and accelerated the rate of intermediate reactions and pyruvate production. The catalytic capacity of the reconstructed ocean milieu was attributable to its metal content. The reactions were particularly sensitive to ferrous iron Fe(II), which is understood to have had high concentrations in the Archean oceans. These observations reveal that reaction sequences that constitute central carbon metabolism could have been constrained by the iron‐rich oceanic environment of the early Archean. The origin of metabolism could thus date back to the prebiotic world.
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spelling pubmed-40233952014-05-16 Non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible Archean ocean Keller, Markus A Turchyn, Alexandra V Ralser, Markus Mol Syst Biol Articles The reaction sequences of central metabolism, glycolysis and the pentose phosphate pathway provide essential precursors for nucleic acids, amino acids and lipids. However, their evolutionary origins are not yet understood. Here, we provide evidence that their structure could have been fundamentally shaped by the general chemical environments in earth's earliest oceans. We reconstructed potential scenarios for oceans of the prebiotic Archean based on the composition of early sediments. We report that the resultant reaction milieu catalyses the interconversion of metabolites that in modern organisms constitute glycolysis and the pentose phosphate pathway. The 29 observed reactions include the formation and/or interconversion of glucose, pyruvate, the nucleic acid precursor ribose‐5‐phosphate and the amino acid precursor erythrose‐4‐phosphate, antedating reactions sequences similar to that used by the metabolic pathways. Moreover, the Archean ocean mimetic increased the stability of the phosphorylated intermediates and accelerated the rate of intermediate reactions and pyruvate production. The catalytic capacity of the reconstructed ocean milieu was attributable to its metal content. The reactions were particularly sensitive to ferrous iron Fe(II), which is understood to have had high concentrations in the Archean oceans. These observations reveal that reaction sequences that constitute central carbon metabolism could have been constrained by the iron‐rich oceanic environment of the early Archean. The origin of metabolism could thus date back to the prebiotic world. European Molecular Biology Organization 2014-04-25 /pmc/articles/PMC4023395/ /pubmed/24771084 http://dx.doi.org/10.1002/msb.20145228 Text en © 2014 EMBO This is an open access article under the terms of the Creative Commons Attribution 4.0 (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Keller, Markus A
Turchyn, Alexandra V
Ralser, Markus
Non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible Archean ocean
title Non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible Archean ocean
title_full Non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible Archean ocean
title_fullStr Non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible Archean ocean
title_full_unstemmed Non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible Archean ocean
title_short Non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible Archean ocean
title_sort non‐enzymatic glycolysis and pentose phosphate pathway‐like reactions in a plausible archean ocean
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4023395/
https://www.ncbi.nlm.nih.gov/pubmed/24771084
http://dx.doi.org/10.1002/msb.20145228
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