The tobacco genome sequence and its comparison with those of tomato and potato

The allotetraploid plant Nicotiana tabacum (common tobacco) is a major crop species and a model organism, for which only very fragmented genomic sequences are currently available. Here we report high-quality draft genomes for three main tobacco varieties. These genomes show both the low divergence o...

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Autores principales: Sierro, Nicolas, Battey, James N.D., Ouadi, Sonia, Bakaher, Nicolas, Bovet, Lucien, Willig, Adrian, Goepfert, Simon, Peitsch, Manuel C., Ivanov, Nikolai V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Pub. Group 2014
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4024737/
https://www.ncbi.nlm.nih.gov/pubmed/24807620
http://dx.doi.org/10.1038/ncomms4833
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author Sierro, Nicolas
Battey, James N.D.
Ouadi, Sonia
Bakaher, Nicolas
Bovet, Lucien
Willig, Adrian
Goepfert, Simon
Peitsch, Manuel C.
Ivanov, Nikolai V.
author_facet Sierro, Nicolas
Battey, James N.D.
Ouadi, Sonia
Bakaher, Nicolas
Bovet, Lucien
Willig, Adrian
Goepfert, Simon
Peitsch, Manuel C.
Ivanov, Nikolai V.
author_sort Sierro, Nicolas
collection PubMed
description The allotetraploid plant Nicotiana tabacum (common tobacco) is a major crop species and a model organism, for which only very fragmented genomic sequences are currently available. Here we report high-quality draft genomes for three main tobacco varieties. These genomes show both the low divergence of tobacco from its ancestors and microsynteny with other Solanaceae species. We identify over 90,000 gene models and determine the ancestral origin of tobacco mosaic virus and potyvirus disease resistance in tobacco. We anticipate that the draft genomes will strengthen the use of N. tabacum as a versatile model organism for functional genomics and biotechnology applications.
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spelling pubmed-40247372014-05-20 The tobacco genome sequence and its comparison with those of tomato and potato Sierro, Nicolas Battey, James N.D. Ouadi, Sonia Bakaher, Nicolas Bovet, Lucien Willig, Adrian Goepfert, Simon Peitsch, Manuel C. Ivanov, Nikolai V. Nat Commun Article The allotetraploid plant Nicotiana tabacum (common tobacco) is a major crop species and a model organism, for which only very fragmented genomic sequences are currently available. Here we report high-quality draft genomes for three main tobacco varieties. These genomes show both the low divergence of tobacco from its ancestors and microsynteny with other Solanaceae species. We identify over 90,000 gene models and determine the ancestral origin of tobacco mosaic virus and potyvirus disease resistance in tobacco. We anticipate that the draft genomes will strengthen the use of N. tabacum as a versatile model organism for functional genomics and biotechnology applications. Nature Pub. Group 2014-05-08 /pmc/articles/PMC4024737/ /pubmed/24807620 http://dx.doi.org/10.1038/ncomms4833 Text en Copyright © 2014, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by-nc-by/3.0/ This work is licensed under a Creative Commons Attribution 3.0 Unported License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/3.0/
spellingShingle Article
Sierro, Nicolas
Battey, James N.D.
Ouadi, Sonia
Bakaher, Nicolas
Bovet, Lucien
Willig, Adrian
Goepfert, Simon
Peitsch, Manuel C.
Ivanov, Nikolai V.
The tobacco genome sequence and its comparison with those of tomato and potato
title The tobacco genome sequence and its comparison with those of tomato and potato
title_full The tobacco genome sequence and its comparison with those of tomato and potato
title_fullStr The tobacco genome sequence and its comparison with those of tomato and potato
title_full_unstemmed The tobacco genome sequence and its comparison with those of tomato and potato
title_short The tobacco genome sequence and its comparison with those of tomato and potato
title_sort tobacco genome sequence and its comparison with those of tomato and potato
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4024737/
https://www.ncbi.nlm.nih.gov/pubmed/24807620
http://dx.doi.org/10.1038/ncomms4833
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