Cargando…

Similar Structures to the E-to-H Helix Unit in the Globin-Like Fold are Found in Other Helical Folds

A protein in the globin-like fold contains six alpha-helices, A, B, E, F, G and H. Among them, the E-to-H helix unit (E, F, G and H helices) forms a compact structure. In this study, we searched similar structures to the E-to-H helix of leghomoglobin in the whole protein structure space using the Da...

Descripción completa

Detalles Bibliográficos
Autores principales:	Matsuoka, Masanari, Fujita, Aoi, Kawai, Yosuke, Kikuchi, Takeshi
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2014
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4030988/ https://www.ncbi.nlm.nih.gov/pubmed/24970216 http://dx.doi.org/10.3390/biom4010268

Ejemplares similares

Sequence analysis on the information of folding initiation segments in ferredoxin-like fold proteins
por: Matsuoka, Masanari, et al.
Publicado: (2014)

To Fold or Not to Fold: Diastereomeric Optimization of an α-Helical Antimicrobial Peptide
por: Personne, Hippolyte, et al.
Publicado: (2023)

Folding and Insertion of Transmembrane Helices at the ER
por: Whitley, Paul, et al.
Publicado: (2021)

Dynamic Surface Activity by Folding and Unfolding an Amphiphilic α-Helix
por: Jain, Vikas, et al.
Publicado: (2008)

Engineering a two-helix bundle protein for folding studies
por: Dodson, Charlotte A., et al.
Publicado: (2010)

Revealing the distinct folding phases of an RNA three-helix junction
por: Plumridge, Alex, et al.
Publicado: (2018)

Solvent Induced Helix Folding of Defined Indolenine Squaraine Oligomers
por: Turkin, Arthur, et al.
Publicado: (2021)

Autonomously folded α-helical lockers promote RNAi*
por: Guyader, Christian P. E., et al.
Publicado: (2016)

Transmembrane but not soluble helices fold inside the ribosome tunnel
por: Bañó-Polo, Manuel, et al.
Publicado: (2018)

Polyamines Mediate Folding of Primordial Hyperacidic Helical Proteins
por: Despotović, Dragana, et al.
Publicado: (2020)

Procollagen Triple Helix Assembly: An Unconventional Chaperone-Assisted Folding Paradigm
por: Makareeva, Elena, et al.
Publicado: (2007)

TMPad: an integrated structural database for helix-packing folds in transmembrane proteins
por: Lo, Allan, et al.
Publicado: (2011)

Transient Non-Native Helix Formation during the Folding of β-Lactoglobulin
por: Ikeguchi, Masamichi
Publicado: (2014)

Probing the Non-Native H Helix Translocation in Apomyoglobin Folding Intermediates
por: Aoto, Phillip C., et al.
Publicado: (2014)

Unfolding and Folding of the Three-Helix Bundle Protein KIX in the Absence of Solvent
por: Schennach, Moritz, et al.
Publicado: (2016)

Molecular basis for the folding of β-helical autotransporter passenger domains
por: Yuan, Xiaojun, et al.
Publicado: (2018)

Probing Protein Folding with Sequence-Reversed α-Helical Bundles
por: Kefala, Aikaterini, et al.
Publicado: (2021)

Methods to study folding of alpha-helical membrane proteins in lipids
por: Harris, Nicola J., et al.
Publicado: (2022)

The NMR structure of the murine DLC2 SAM domain reveals a variant fold that is similar to a four-helix bundle
por: Kwan, Jamie J, et al.
Publicado: (2007)

Similarities between protein folding and granular jamming
por: Jose, Prasanth P, et al.
Publicado: (2012)

Does a Similar 3D Structure Mean a Similar Folding Pathway? The Presence of a C-Terminal α-Helical Extension in the 3D Structure of MAX60 Drastically Changes the Folding Pathway Described for Other MAX-Effectors from Magnaporthe oryzae
por: Lahfa, Mounia, et al.
Publicado: (2023)

Solvent-Exposed Salt Bridges Influence the Kinetics of α-Helix Folding and Unfolding
por: Meuzelaar, Heleen, et al.
Publicado: (2014)

Protein folding of the SAP domain, a naturally occurring two-helix bundle
por: Dodson, Charlotte A., et al.
Publicado: (2015)

Nearest neighbor rules for RNA helix folding thermodynamics: improved end effects
por: Zuber, Jeffrey, et al.
Publicado: (2022)

Crystalline structures of polymeric hydrocarbon with 3,4-fold helical chains
por: Lian, Chao-Sheng, et al.
Publicado: (2015)

Accelerated Molecular Dynamics Simulation for Helical Proteins Folding in Explicit Water
por: Duan, Lili, et al.
Publicado: (2019)

TmAlphaFold database: membrane localization and evaluation of AlphaFold2 predicted alpha-helical transmembrane protein structures
por: Dobson, Laszlo, et al.
Publicado: (2022)

Proteins with Highly Similar Native Folds Can Show Vastly Dissimilar Folding Behavior When Desolvated**
por: Schennach, Moritz, et al.
Publicado: (2014)

Different Members of a Simple Three-Helix Bundle Protein Family Have Very Different Folding Rate Constants and Fold by Different Mechanisms
por: Wensley, Beth G., et al.
Publicado: (2009)

Decoding an Amino Acid Sequence to Extract Information on Protein Folding
por: Kikuchi, Takeshi
Publicado: (2022)

Analyses of the folding sites of irregular β-trefoil fold proteins through sequence-based techniques and Gō-model simulations
por: Kimura, Risako, et al.
Publicado: (2020)

Functional evolution of two subtly different (similar) folds
por: Agrawal, Vishal, et al.
Publicado: (2001)

Protein Folding: Adding a Nucleus to Guide Helix Docking Reduces Landscape Roughness
por: Wensley, Beth G., et al.
Publicado: (2012)

The Folding of a Family of Three-Helix Bundle Proteins: Spectrin R15 Has a Robust Folding Nucleus, Unlike Its Homologous Neighbours()
por: Kwa, Lee Gyan, et al.
Publicado: (2014)

α-Synuclein occurs physiologically as a helically folded tetramer that resists aggregation
por: Bartels, Tim, et al.
Publicado: (2011)

Exposing the distinctive modular behavior of β-strands and α-helices in folded proteins
por: Wang, Huabing, et al.
Publicado: (2020)

The RAGNYA fold: a novel fold with multiple topological variants found in functionally diverse nucleic acid, nucleotide and peptide-binding proteins
por: Balaji, S., et al.
Publicado: (2007)

The RNA-bound proteome of MRSA reveals post-transcriptional roles for helix-turn-helix DNA-binding and Rossmann-fold proteins
por: Chu, Liang-Cui, et al.
Publicado: (2022)

Flips for 3-folds and 4-folds
por: Corti, Alessio
Publicado: (2007)

Comparing the Folds of Prions and Other Pathogenic Amyloids
por: Flores-Fernández, José Miguel, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_evkuad43723n42gcc6ajdu4g95