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Engineering a thalamo-cortico-thalamic circuit on SpiNNaker: a preliminary study toward modeling sleep and wakefulness

We present a preliminary study of a thalamo-cortico-thalamic (TCT) implementation on SpiNNaker (Spiking Neural Network architecture), a brain inspired hardware platform designed to incorporate the inherent biological properties of parallelism, fault tolerance and energy efficiency. These attributes...

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Autores principales: Bhattacharya, Basabdatta S., Patterson, Cameron, Galluppi, Francesco, Durrant, Simon J., Furber, Steve
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4033042/
https://www.ncbi.nlm.nih.gov/pubmed/24904294
http://dx.doi.org/10.3389/fncir.2014.00046
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author Bhattacharya, Basabdatta S.
Patterson, Cameron
Galluppi, Francesco
Durrant, Simon J.
Furber, Steve
author_facet Bhattacharya, Basabdatta S.
Patterson, Cameron
Galluppi, Francesco
Durrant, Simon J.
Furber, Steve
author_sort Bhattacharya, Basabdatta S.
collection PubMed
description We present a preliminary study of a thalamo-cortico-thalamic (TCT) implementation on SpiNNaker (Spiking Neural Network architecture), a brain inspired hardware platform designed to incorporate the inherent biological properties of parallelism, fault tolerance and energy efficiency. These attributes make SpiNNaker an ideal platform for simulating biologically plausible computational models. Our focus in this work is to design a TCT framework that can be simulated on SpiNNaker to mimic dynamical behavior similar to Electroencephalogram (EEG) time and power-spectra signatures in sleep-wake transition. The scale of the model is minimized for simplicity in this proof-of-concept study; thus the total number of spiking neurons is ≈1000 and represents a “mini-column” of the thalamocortical tissue. All data on model structure, synaptic layout and parameters is inspired from previous studies and abstracted at a level that is appropriate to the aims of the current study as well as computationally suitable for model simulation on a small 4-chip SpiNNaker system. The initial results from selective deletion of synaptic connectivity parameters in the model show similarity with EEG power spectra characteristics of sleep and wakefulness. These observations provide a positive perspective and a basis for future implementation of a very large scale biologically plausible model of thalamo-cortico-thalamic interactivity—the essential brain circuit that regulates the biological sleep-wake cycle and associated EEG rhythms.
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spelling pubmed-40330422014-06-05 Engineering a thalamo-cortico-thalamic circuit on SpiNNaker: a preliminary study toward modeling sleep and wakefulness Bhattacharya, Basabdatta S. Patterson, Cameron Galluppi, Francesco Durrant, Simon J. Furber, Steve Front Neural Circuits Neuroscience We present a preliminary study of a thalamo-cortico-thalamic (TCT) implementation on SpiNNaker (Spiking Neural Network architecture), a brain inspired hardware platform designed to incorporate the inherent biological properties of parallelism, fault tolerance and energy efficiency. These attributes make SpiNNaker an ideal platform for simulating biologically plausible computational models. Our focus in this work is to design a TCT framework that can be simulated on SpiNNaker to mimic dynamical behavior similar to Electroencephalogram (EEG) time and power-spectra signatures in sleep-wake transition. The scale of the model is minimized for simplicity in this proof-of-concept study; thus the total number of spiking neurons is ≈1000 and represents a “mini-column” of the thalamocortical tissue. All data on model structure, synaptic layout and parameters is inspired from previous studies and abstracted at a level that is appropriate to the aims of the current study as well as computationally suitable for model simulation on a small 4-chip SpiNNaker system. The initial results from selective deletion of synaptic connectivity parameters in the model show similarity with EEG power spectra characteristics of sleep and wakefulness. These observations provide a positive perspective and a basis for future implementation of a very large scale biologically plausible model of thalamo-cortico-thalamic interactivity—the essential brain circuit that regulates the biological sleep-wake cycle and associated EEG rhythms. Frontiers Media S.A. 2014-05-20 /pmc/articles/PMC4033042/ /pubmed/24904294 http://dx.doi.org/10.3389/fncir.2014.00046 Text en Copyright © 2014 Bhattacharya, Patterson, Galluppi, Durrant and Furber. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Bhattacharya, Basabdatta S.
Patterson, Cameron
Galluppi, Francesco
Durrant, Simon J.
Furber, Steve
Engineering a thalamo-cortico-thalamic circuit on SpiNNaker: a preliminary study toward modeling sleep and wakefulness
title Engineering a thalamo-cortico-thalamic circuit on SpiNNaker: a preliminary study toward modeling sleep and wakefulness
title_full Engineering a thalamo-cortico-thalamic circuit on SpiNNaker: a preliminary study toward modeling sleep and wakefulness
title_fullStr Engineering a thalamo-cortico-thalamic circuit on SpiNNaker: a preliminary study toward modeling sleep and wakefulness
title_full_unstemmed Engineering a thalamo-cortico-thalamic circuit on SpiNNaker: a preliminary study toward modeling sleep and wakefulness
title_short Engineering a thalamo-cortico-thalamic circuit on SpiNNaker: a preliminary study toward modeling sleep and wakefulness
title_sort engineering a thalamo-cortico-thalamic circuit on spinnaker: a preliminary study toward modeling sleep and wakefulness
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4033042/
https://www.ncbi.nlm.nih.gov/pubmed/24904294
http://dx.doi.org/10.3389/fncir.2014.00046
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