Cargando…

Chemical-genomic dissection of the CTD code

Sequential modifications of the RNA polymerase II (Pol II) carboxyl-terminal domain (CTD) coordinate the stage-specific association and release of cellular machines during transcription. Here we examine the genome-wide distributions of the “early” (phospho-serine 5), “mid” (phospho-serine 7) and “la...

Descripción completa

Detalles Bibliográficos
Autores principales:	Tietjen, Joshua R., Zhang, David W., Rodríguez-Molina, Juan B., White, Brent E., Akhtar, Md. Sohail, Heidemann, Martin, Li, Xin, Chapman, Rob D., Shokat, Kevan, Keles, Sündüz, Eick, Dirk, Ansari, Aseem Z.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	2010
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4035229/ https://www.ncbi.nlm.nih.gov/pubmed/20802488 http://dx.doi.org/10.1038/nsmb.1900

Ejemplares similares

Emerging Views on the CTD Code
por: Zhang, David W., et al.
Publicado: (2012)

Tyrosine-1 and threonine-4 phosphorylation marks complete the RNA polymerase II CTD phospho-code
por: Heidemann, Martin, et al.
Publicado: (2012)

Non-canonical CTD-kinases regulate RNA polymerase II in a gene-class specific manner
por: Nemec, Corey M., et al.
Publicado: (2018)

Specific threonine-4 phosphorylation and function of RNA polymerase II CTD during M phase progression
por: Hintermair, Corinna, et al.
Publicado: (2016)

Extension of the minimal functional unit of the RNA polymerase II CTD from yeast to mammalian cells
por: Shah, Nilay, et al.
Publicado: (2019)

CSI-Tree: a regression tree approach for modeling binding properties of DNA-binding molecules based on cognate site identification (CSI) data
por: Keleş, Sündüz, et al.
Publicado: (2008)

CTD serine-2 plays a critical role in splicing and termination factor recruitment to RNA polymerase II in vivo
por: Gu, Bo, et al.
Publicado: (2013)

Tyrosine phosphorylation of RNA polymerase II CTD is associated with antisense promoter transcription and active enhancers in mammalian cells
por: Descostes, Nicolas, et al.
Publicado: (2014)

Site-specific methylation and acetylation of lysine residues in the C-terminal domain (CTD) of RNA polymerase II
por: Voss, Kirsten, et al.
Publicado: (2015)

Transition from initiation to promoter proximal pausing requires the CTD of RNA polymerase II
por: Lux, C., et al.
Publicado: (2005)

Gene-specific RNA pol II phosphorylation and the "CTD code"
por: Kim, Hyunmin, et al.
Publicado: (2010)

Promoter nucleosome dynamics regulated by signalling through the CTD code
por: Materne, Philippe, et al.
Publicado: (2015)

RNA polymerase II CTD is dispensable for transcription and required for termination in human cells
por: Yahia, Yousra, et al.
Publicado: (2023)

The mRNA capping enzyme of Saccharomyces cerevisiae has dual specificity to interact with CTD of RNA Polymerase II
por: Bharati, Akhilendra Pratap, et al.
Publicado: (2016)

Fission yeast RNA triphosphatase reads an Spt5 CTD code
por: Doamekpor, Selom K., et al.
Publicado: (2015)

Termination of non‐coding transcription in yeast relies on both an RNA Pol II CTD interaction domain and a CTD‐mimicking region in Sen1
por: Han, Zhong, et al.
Publicado: (2020)

The Comparative Toxicogenomics Database (CTD).
por: Mattingly, Carolyn J, et al.
Publicado: (2003)

Connecting The Dots (CTD 2022)
Publicado: (2022)

Connecting The Dots (CTD 2023)
por: Annovi, Alberto, et al.
Publicado: (2023)

Connecting The Dots 2020 (CTD 2020)
por: Lange, David
Publicado: (2020)

The Bacterial Response Regulator ArcA Uses a Diverse Binding Site Architecture to Regulate Carbon Oxidation Globally
por: Park, Dan M., et al.
Publicado: (2013)

Sparse partial least squares regression for simultaneous dimension reduction and variable selection
por: Chun, Hyonho, et al.
Publicado: (2010)

Normalization of ChIP-seq data with control
por: Liang, Kun, et al.
Publicado: (2012)

SURF: integrative analysis of a compendium of RNA-seq and CLIP-seq datasets highlights complex governing of alternative transcriptional regulation by RNA-binding proteins
por: Chen, Fan, et al.
Publicado: (2020)

FreeHi-C simulates high fidelity Hi-C data for benchmarking and data augmentation
por: Zheng, Ye, et al.
Publicado: (2019)

Joint tensor modeling of single cell 3D genome and epigenetic data with Muscle
por: Park, Kwangmoon, et al.
Publicado: (2023)

Dozer: Debiased personalized gene co-expression networks for population-scale scRNA-seq data
por: Lu, Shan, et al.
Publicado: (2023)

Debiased personalized gene coexpression networks for population-scale scRNA-seq data
por: Lu, Shan, et al.
Publicado: (2023)

Updating the CTD Story: From Tail to Epic
por: Bartkowiak, Bartlomiej, et al.
Publicado: (2011)

Comparative Toxicogenomics Database (CTD): update 2021
por: Davis, Allan Peter, et al.
Publicado: (2020)

Comparative Toxicogenomics Database (CTD): update 2023
por: Davis, Allan Peter, et al.
Publicado: (2022)

Site-specific incorporation of phosphotyrosine using an expanded genetic code
por: Hoppmann, Christian, et al.
Publicado: (2017)

Clinical Performance of Two Automated Immunoassays, EliA CTD Screen and QUANTA Flash CTD Screen Plus, for Antinuclear Antibody Screening
por: Yoon, Sumi, et al.
Publicado: (2022)

Chemical acylation of an acquired serine suppresses oncogenic signaling of K-Ras(G12S)
por: Zhang, Ziyang, et al.
Publicado: (2022)

Generative modeling of multi-mapping reads with mHi-C advances analysis of Hi-C studies
por: Zheng, Ye, et al.
Publicado: (2019)

Normalization and de-noising of single-cell Hi-C data with BandNorm and scVI-3D
por: Zheng, Ye, et al.
Publicado: (2022)

AdaLiftOver: high-resolution identification of orthologous regulatory elements with Adaptive liftOver
por: Dong, Chenyang, et al.
Publicado: (2023)

Chromatin structure-dependent conformations of the H1 CTD
por: Fang, He, et al.
Publicado: (2016)

Structure of TFIIK for phosphorylation of CTD of RNA polymerase II
por: van Eeuwen, Trevor, et al.
Publicado: (2021)

Mediator and Pol II go to eleven (CTD repeats)
por: Kaplan, Craig D.
Publicado: (2023)

Cannot write session to /tmp/vufind_sessions/sess_jqf5r2gic5ncj68gqil89c0fhe