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Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System

Aqueous humor (AH) is one of the body fluids in the eye, which is known to be related with various ocular diseases, but the complete RNAs characteristic of the AH in patients is not yet known. The aim of this study was, with a microarray analysis, to reveal the disease-related extracellular miRNAs p...

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Autores principales: Tanaka, Yuji, Tsuda, Satoru, Kunikata, Hiroshi, Sato, Junko, Kokubun, Taiki, Yasuda, Masayuki, Nishiguchi, Koji M, Inada, Toshifumi, Nakazawa, Toru
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4035584/
https://www.ncbi.nlm.nih.gov/pubmed/24867291
http://dx.doi.org/10.1038/srep05089
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author Tanaka, Yuji
Tsuda, Satoru
Kunikata, Hiroshi
Sato, Junko
Kokubun, Taiki
Yasuda, Masayuki
Nishiguchi, Koji M
Inada, Toshifumi
Nakazawa, Toru
author_facet Tanaka, Yuji
Tsuda, Satoru
Kunikata, Hiroshi
Sato, Junko
Kokubun, Taiki
Yasuda, Masayuki
Nishiguchi, Koji M
Inada, Toshifumi
Nakazawa, Toru
author_sort Tanaka, Yuji
collection PubMed
description Aqueous humor (AH) is one of the body fluids in the eye, which is known to be related with various ocular diseases, but the complete RNAs characteristic of the AH in patients is not yet known. The aim of this study was, with a microarray analysis, to reveal the disease-related extracellular miRNAs profiles in individual patients AH. 100 μl of AH was collected by anterior chamber paracentesis from 10 glaucoma, 5 cataract, and 5 epiretinal membrane patients. The extracted total RNAs were shorter than 200 nt, and their amount was 5.27 ± 0.41 ng in average. Among 530.5 ± 44.6 miRNA types detected in each sample with a microarray detectable 2019 types of matured miRNAs, 172 miRNAs were detected in all 10 glaucoma or control patients. From the glaucoma group, 11 significantly up-regulated and 18 significantly down-regulated miRNAs (P < 0.05 for both) were found to have areas under the curve better than 0.74 in a receiver operating characteristic analysis. They also formed a cluster composed only of glaucoma patients in a hierarchal cluster analysis. AH had a possibility of becoming a source of miRNA that can serve as a biomarker and a therapeutic target.
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spelling pubmed-40355842014-05-28 Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System Tanaka, Yuji Tsuda, Satoru Kunikata, Hiroshi Sato, Junko Kokubun, Taiki Yasuda, Masayuki Nishiguchi, Koji M Inada, Toshifumi Nakazawa, Toru Sci Rep Article Aqueous humor (AH) is one of the body fluids in the eye, which is known to be related with various ocular diseases, but the complete RNAs characteristic of the AH in patients is not yet known. The aim of this study was, with a microarray analysis, to reveal the disease-related extracellular miRNAs profiles in individual patients AH. 100 μl of AH was collected by anterior chamber paracentesis from 10 glaucoma, 5 cataract, and 5 epiretinal membrane patients. The extracted total RNAs were shorter than 200 nt, and their amount was 5.27 ± 0.41 ng in average. Among 530.5 ± 44.6 miRNA types detected in each sample with a microarray detectable 2019 types of matured miRNAs, 172 miRNAs were detected in all 10 glaucoma or control patients. From the glaucoma group, 11 significantly up-regulated and 18 significantly down-regulated miRNAs (P < 0.05 for both) were found to have areas under the curve better than 0.74 in a receiver operating characteristic analysis. They also formed a cluster composed only of glaucoma patients in a hierarchal cluster analysis. AH had a possibility of becoming a source of miRNA that can serve as a biomarker and a therapeutic target. Nature Publishing Group 2014-05-28 /pmc/articles/PMC4035584/ /pubmed/24867291 http://dx.doi.org/10.1038/srep05089 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. The images in this article are included in the article's Creative Commons license, unless indicated otherwise in the image credit; if the image is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the image. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/
spellingShingle Article
Tanaka, Yuji
Tsuda, Satoru
Kunikata, Hiroshi
Sato, Junko
Kokubun, Taiki
Yasuda, Masayuki
Nishiguchi, Koji M
Inada, Toshifumi
Nakazawa, Toru
Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System
title Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System
title_full Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System
title_fullStr Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System
title_full_unstemmed Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System
title_short Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System
title_sort profiles of extracellular mirnas in the aqueous humor of glaucoma patients assessed with a microarray system
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4035584/
https://www.ncbi.nlm.nih.gov/pubmed/24867291
http://dx.doi.org/10.1038/srep05089
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