Cargando…
Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System
Aqueous humor (AH) is one of the body fluids in the eye, which is known to be related with various ocular diseases, but the complete RNAs characteristic of the AH in patients is not yet known. The aim of this study was, with a microarray analysis, to reveal the disease-related extracellular miRNAs p...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4035584/ https://www.ncbi.nlm.nih.gov/pubmed/24867291 http://dx.doi.org/10.1038/srep05089 |
_version_ | 1782318068088700928 |
---|---|
author | Tanaka, Yuji Tsuda, Satoru Kunikata, Hiroshi Sato, Junko Kokubun, Taiki Yasuda, Masayuki Nishiguchi, Koji M Inada, Toshifumi Nakazawa, Toru |
author_facet | Tanaka, Yuji Tsuda, Satoru Kunikata, Hiroshi Sato, Junko Kokubun, Taiki Yasuda, Masayuki Nishiguchi, Koji M Inada, Toshifumi Nakazawa, Toru |
author_sort | Tanaka, Yuji |
collection | PubMed |
description | Aqueous humor (AH) is one of the body fluids in the eye, which is known to be related with various ocular diseases, but the complete RNAs characteristic of the AH in patients is not yet known. The aim of this study was, with a microarray analysis, to reveal the disease-related extracellular miRNAs profiles in individual patients AH. 100 μl of AH was collected by anterior chamber paracentesis from 10 glaucoma, 5 cataract, and 5 epiretinal membrane patients. The extracted total RNAs were shorter than 200 nt, and their amount was 5.27 ± 0.41 ng in average. Among 530.5 ± 44.6 miRNA types detected in each sample with a microarray detectable 2019 types of matured miRNAs, 172 miRNAs were detected in all 10 glaucoma or control patients. From the glaucoma group, 11 significantly up-regulated and 18 significantly down-regulated miRNAs (P < 0.05 for both) were found to have areas under the curve better than 0.74 in a receiver operating characteristic analysis. They also formed a cluster composed only of glaucoma patients in a hierarchal cluster analysis. AH had a possibility of becoming a source of miRNA that can serve as a biomarker and a therapeutic target. |
format | Online Article Text |
id | pubmed-4035584 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-40355842014-05-28 Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System Tanaka, Yuji Tsuda, Satoru Kunikata, Hiroshi Sato, Junko Kokubun, Taiki Yasuda, Masayuki Nishiguchi, Koji M Inada, Toshifumi Nakazawa, Toru Sci Rep Article Aqueous humor (AH) is one of the body fluids in the eye, which is known to be related with various ocular diseases, but the complete RNAs characteristic of the AH in patients is not yet known. The aim of this study was, with a microarray analysis, to reveal the disease-related extracellular miRNAs profiles in individual patients AH. 100 μl of AH was collected by anterior chamber paracentesis from 10 glaucoma, 5 cataract, and 5 epiretinal membrane patients. The extracted total RNAs were shorter than 200 nt, and their amount was 5.27 ± 0.41 ng in average. Among 530.5 ± 44.6 miRNA types detected in each sample with a microarray detectable 2019 types of matured miRNAs, 172 miRNAs were detected in all 10 glaucoma or control patients. From the glaucoma group, 11 significantly up-regulated and 18 significantly down-regulated miRNAs (P < 0.05 for both) were found to have areas under the curve better than 0.74 in a receiver operating characteristic analysis. They also formed a cluster composed only of glaucoma patients in a hierarchal cluster analysis. AH had a possibility of becoming a source of miRNA that can serve as a biomarker and a therapeutic target. Nature Publishing Group 2014-05-28 /pmc/articles/PMC4035584/ /pubmed/24867291 http://dx.doi.org/10.1038/srep05089 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. The images in this article are included in the article's Creative Commons license, unless indicated otherwise in the image credit; if the image is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the image. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ |
spellingShingle | Article Tanaka, Yuji Tsuda, Satoru Kunikata, Hiroshi Sato, Junko Kokubun, Taiki Yasuda, Masayuki Nishiguchi, Koji M Inada, Toshifumi Nakazawa, Toru Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System |
title | Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System |
title_full | Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System |
title_fullStr | Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System |
title_full_unstemmed | Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System |
title_short | Profiles of Extracellular miRNAs in the Aqueous Humor of Glaucoma Patients Assessed with a Microarray System |
title_sort | profiles of extracellular mirnas in the aqueous humor of glaucoma patients assessed with a microarray system |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4035584/ https://www.ncbi.nlm.nih.gov/pubmed/24867291 http://dx.doi.org/10.1038/srep05089 |
work_keys_str_mv | AT tanakayuji profilesofextracellularmirnasintheaqueoushumorofglaucomapatientsassessedwithamicroarraysystem AT tsudasatoru profilesofextracellularmirnasintheaqueoushumorofglaucomapatientsassessedwithamicroarraysystem AT kunikatahiroshi profilesofextracellularmirnasintheaqueoushumorofglaucomapatientsassessedwithamicroarraysystem AT satojunko profilesofextracellularmirnasintheaqueoushumorofglaucomapatientsassessedwithamicroarraysystem AT kokubuntaiki profilesofextracellularmirnasintheaqueoushumorofglaucomapatientsassessedwithamicroarraysystem AT yasudamasayuki profilesofextracellularmirnasintheaqueoushumorofglaucomapatientsassessedwithamicroarraysystem AT nishiguchikojim profilesofextracellularmirnasintheaqueoushumorofglaucomapatientsassessedwithamicroarraysystem AT inadatoshifumi profilesofextracellularmirnasintheaqueoushumorofglaucomapatientsassessedwithamicroarraysystem AT nakazawatoru profilesofextracellularmirnasintheaqueoushumorofglaucomapatientsassessedwithamicroarraysystem |