Cargando…
Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity
Ganoderma has been considered a very difficult genus among the polypores to classify and is currently in a state of taxonomic chaos. In a study of Ganoderma collections including numerous type specimens, we found that six species namely G. cupreum, G. densizonatum, G. limushanense, G. mastoporum, G....
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4038584/ https://www.ncbi.nlm.nih.gov/pubmed/24875218 http://dx.doi.org/10.1371/journal.pone.0098733 |
_version_ | 1782318369676984320 |
---|---|
author | Wang, Dong-Mei Wu, Sheng-Hua Yao, Yi-Jian |
author_facet | Wang, Dong-Mei Wu, Sheng-Hua Yao, Yi-Jian |
author_sort | Wang, Dong-Mei |
collection | PubMed |
description | Ganoderma has been considered a very difficult genus among the polypores to classify and is currently in a state of taxonomic chaos. In a study of Ganoderma collections including numerous type specimens, we found that six species namely G. cupreum, G. densizonatum, G. limushanense, G. mastoporum, G. orbiforme, G. subtornatum, and records of G. fornicatum from Mainland China and Taiwan are very similar to one another in basidiocarp texture, pilear cuticle structure, context color, pore color and basidiospore characteristics. Further, we sequenced the nrDNA ITS region (ITS1 and ITS2) and partial mtDNA SSU region of the studied materials, and performed phylogenetic analyses based on these sequence data. The nrDNA ITS sequence analysis results show that the eight nrDNA ITS sequences derived from this study have single-nucleotide polymorphisms in ITS1 and/or ITS2 at inter- and intra-individual levels. In the nrDNA ITS phylogenetic trees, all the sequences from this study are grouped together with those of G. cupreum and G. mastoporum retrieved from GenBank to form a distinct clade. The mtDNA SSU sequence analysis results reveal that the five mtDNA SSU sequences derived from this study are clustered together with those of G. cupreum retrieved from GenBank and also form a distinct clade in the mtDNA SSU phylogenetic trees. Based on morphological and molecular data, we conclude that the studied taxa are conspecific. Among the names assigned to this species, G. fornicatum given to Asian collections has nomenclatural priority over the others. However, the type of G. fornicatum from Brazil is probably lost and a modern description based on the type lacks. The identification of the Asian collections to G. fornicatum therefore cannot be confirmed. To the best of our knowledge, G. orbiforme is the earliest valid name for use. |
format | Online Article Text |
id | pubmed-4038584 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-40385842014-06-05 Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity Wang, Dong-Mei Wu, Sheng-Hua Yao, Yi-Jian PLoS One Research Article Ganoderma has been considered a very difficult genus among the polypores to classify and is currently in a state of taxonomic chaos. In a study of Ganoderma collections including numerous type specimens, we found that six species namely G. cupreum, G. densizonatum, G. limushanense, G. mastoporum, G. orbiforme, G. subtornatum, and records of G. fornicatum from Mainland China and Taiwan are very similar to one another in basidiocarp texture, pilear cuticle structure, context color, pore color and basidiospore characteristics. Further, we sequenced the nrDNA ITS region (ITS1 and ITS2) and partial mtDNA SSU region of the studied materials, and performed phylogenetic analyses based on these sequence data. The nrDNA ITS sequence analysis results show that the eight nrDNA ITS sequences derived from this study have single-nucleotide polymorphisms in ITS1 and/or ITS2 at inter- and intra-individual levels. In the nrDNA ITS phylogenetic trees, all the sequences from this study are grouped together with those of G. cupreum and G. mastoporum retrieved from GenBank to form a distinct clade. The mtDNA SSU sequence analysis results reveal that the five mtDNA SSU sequences derived from this study are clustered together with those of G. cupreum retrieved from GenBank and also form a distinct clade in the mtDNA SSU phylogenetic trees. Based on morphological and molecular data, we conclude that the studied taxa are conspecific. Among the names assigned to this species, G. fornicatum given to Asian collections has nomenclatural priority over the others. However, the type of G. fornicatum from Brazil is probably lost and a modern description based on the type lacks. The identification of the Asian collections to G. fornicatum therefore cannot be confirmed. To the best of our knowledge, G. orbiforme is the earliest valid name for use. Public Library of Science 2014-05-29 /pmc/articles/PMC4038584/ /pubmed/24875218 http://dx.doi.org/10.1371/journal.pone.0098733 Text en © 2014 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Wang, Dong-Mei Wu, Sheng-Hua Yao, Yi-Jian Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity |
title | Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity |
title_full | Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity |
title_fullStr | Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity |
title_full_unstemmed | Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity |
title_short | Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity |
title_sort | clarification of the concept of ganoderma orbiforme with high morphological plasticity |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4038584/ https://www.ncbi.nlm.nih.gov/pubmed/24875218 http://dx.doi.org/10.1371/journal.pone.0098733 |
work_keys_str_mv | AT wangdongmei clarificationoftheconceptofganodermaorbiformewithhighmorphologicalplasticity AT wushenghua clarificationoftheconceptofganodermaorbiformewithhighmorphologicalplasticity AT yaoyijian clarificationoftheconceptofganodermaorbiformewithhighmorphologicalplasticity |