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Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity

Ganoderma has been considered a very difficult genus among the polypores to classify and is currently in a state of taxonomic chaos. In a study of Ganoderma collections including numerous type specimens, we found that six species namely G. cupreum, G. densizonatum, G. limushanense, G. mastoporum, G....

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Autores principales: Wang, Dong-Mei, Wu, Sheng-Hua, Yao, Yi-Jian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4038584/
https://www.ncbi.nlm.nih.gov/pubmed/24875218
http://dx.doi.org/10.1371/journal.pone.0098733
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author Wang, Dong-Mei
Wu, Sheng-Hua
Yao, Yi-Jian
author_facet Wang, Dong-Mei
Wu, Sheng-Hua
Yao, Yi-Jian
author_sort Wang, Dong-Mei
collection PubMed
description Ganoderma has been considered a very difficult genus among the polypores to classify and is currently in a state of taxonomic chaos. In a study of Ganoderma collections including numerous type specimens, we found that six species namely G. cupreum, G. densizonatum, G. limushanense, G. mastoporum, G. orbiforme, G. subtornatum, and records of G. fornicatum from Mainland China and Taiwan are very similar to one another in basidiocarp texture, pilear cuticle structure, context color, pore color and basidiospore characteristics. Further, we sequenced the nrDNA ITS region (ITS1 and ITS2) and partial mtDNA SSU region of the studied materials, and performed phylogenetic analyses based on these sequence data. The nrDNA ITS sequence analysis results show that the eight nrDNA ITS sequences derived from this study have single-nucleotide polymorphisms in ITS1 and/or ITS2 at inter- and intra-individual levels. In the nrDNA ITS phylogenetic trees, all the sequences from this study are grouped together with those of G. cupreum and G. mastoporum retrieved from GenBank to form a distinct clade. The mtDNA SSU sequence analysis results reveal that the five mtDNA SSU sequences derived from this study are clustered together with those of G. cupreum retrieved from GenBank and also form a distinct clade in the mtDNA SSU phylogenetic trees. Based on morphological and molecular data, we conclude that the studied taxa are conspecific. Among the names assigned to this species, G. fornicatum given to Asian collections has nomenclatural priority over the others. However, the type of G. fornicatum from Brazil is probably lost and a modern description based on the type lacks. The identification of the Asian collections to G. fornicatum therefore cannot be confirmed. To the best of our knowledge, G. orbiforme is the earliest valid name for use.
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spelling pubmed-40385842014-06-05 Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity Wang, Dong-Mei Wu, Sheng-Hua Yao, Yi-Jian PLoS One Research Article Ganoderma has been considered a very difficult genus among the polypores to classify and is currently in a state of taxonomic chaos. In a study of Ganoderma collections including numerous type specimens, we found that six species namely G. cupreum, G. densizonatum, G. limushanense, G. mastoporum, G. orbiforme, G. subtornatum, and records of G. fornicatum from Mainland China and Taiwan are very similar to one another in basidiocarp texture, pilear cuticle structure, context color, pore color and basidiospore characteristics. Further, we sequenced the nrDNA ITS region (ITS1 and ITS2) and partial mtDNA SSU region of the studied materials, and performed phylogenetic analyses based on these sequence data. The nrDNA ITS sequence analysis results show that the eight nrDNA ITS sequences derived from this study have single-nucleotide polymorphisms in ITS1 and/or ITS2 at inter- and intra-individual levels. In the nrDNA ITS phylogenetic trees, all the sequences from this study are grouped together with those of G. cupreum and G. mastoporum retrieved from GenBank to form a distinct clade. The mtDNA SSU sequence analysis results reveal that the five mtDNA SSU sequences derived from this study are clustered together with those of G. cupreum retrieved from GenBank and also form a distinct clade in the mtDNA SSU phylogenetic trees. Based on morphological and molecular data, we conclude that the studied taxa are conspecific. Among the names assigned to this species, G. fornicatum given to Asian collections has nomenclatural priority over the others. However, the type of G. fornicatum from Brazil is probably lost and a modern description based on the type lacks. The identification of the Asian collections to G. fornicatum therefore cannot be confirmed. To the best of our knowledge, G. orbiforme is the earliest valid name for use. Public Library of Science 2014-05-29 /pmc/articles/PMC4038584/ /pubmed/24875218 http://dx.doi.org/10.1371/journal.pone.0098733 Text en © 2014 Wang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Wang, Dong-Mei
Wu, Sheng-Hua
Yao, Yi-Jian
Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity
title Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity
title_full Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity
title_fullStr Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity
title_full_unstemmed Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity
title_short Clarification of the Concept of Ganoderma orbiforme with High Morphological Plasticity
title_sort clarification of the concept of ganoderma orbiforme with high morphological plasticity
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4038584/
https://www.ncbi.nlm.nih.gov/pubmed/24875218
http://dx.doi.org/10.1371/journal.pone.0098733
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