Cargando…

The multiplicity of alternative splicing decisions in Caenorhabditis elegans is linked to specific intronic regulatory motifs and minisatellites

BACKGROUND: Alternative splicing diversifies the pool of messenger RNA molecules encoded by individual genes. This diversity is particularly high when multiple splicing decisions cause a combinatorial arrangement of several alternate exons. We know very little on how the multiple decisions occurring...

Descripción completa

Detalles Bibliográficos
Autor principal:	Glauser, Dominique A
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2014
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4039745/ https://www.ncbi.nlm.nih.gov/pubmed/24884695 http://dx.doi.org/10.1186/1471-2164-15-364

Ejemplares similares

Conserved Motifs and Prediction of Regulatory Modules in Caenorhabditis elegans
por: Zhao, Guoyan, et al.
Publicado: (2012)

Co-regulation of alternative splicing by diverse splicing factors in Caenorhabditis elegans
por: Barberan-Soler, Sergio, et al.
Publicado: (2011)

Expression patterns of intronic microRNAs in Caenorhabditis elegans
por: Isik, Meltem, et al.
Publicado: (2010)

Intron mis-splicing: no alternative?
por: Roy, Scott William, et al.
Publicado: (2008)

Strategies for Identifying RNA Splicing Regulatory Motifs and Predicting Alternative Splicing Events
por: Holste, Dirk, et al.
Publicado: (2008)

Identification of motifs that function in the splicing of non-canonical introns
por: Murray, Jill I, et al.
Publicado: (2008)

Intronic Alus Influence Alternative Splicing
por: Lev-Maor, Galit, et al.
Publicado: (2008)

Distinct clusters of human pain gene orthologs in Caenorhabditis elegans regulate thermo-nociceptive sensitivity and plasticity
por: Jordan, Aurore, et al.
Publicado: (2023)

The splicing regulatory element, UGCAUG, is phylogenetically and spatially conserved in introns that flank tissue-specific alternative exons
por: Minovitsky, Simon, et al.
Publicado: (2005)

An Intronic Signal for Alternative Splicing in the Human Genome
por: Havlioglu, Necat, et al.
Publicado: (2007)

Evolution of Exon-Intron Structure and Alternative Splicing
por: Koralewski, Tomasz E., et al.
Publicado: (2011)

Genetic identification, sequence, and alternative splicing of the Caenorhabditis elegans alpha 2(IV) collagen gene
Publicado: (1993)

The Caenorhabditis elegans Gene mfap-1 Encodes a Nuclear Protein That Affects Alternative Splicing
por: Ma, Long, et al.
Publicado: (2012)

N-Ethyl-N-Nitrosourea (ENU) Mutagenesis Reveals an Intronic Residue Critical for Caenorhabditis elegans 3′ Splice Site Function in Vivo
por: Itani, Omar A., et al.
Publicado: (2016)

Minor intron splicing revisited: identification of new minor intron-containing genes and tissue-dependent retention and alternative splicing of minor introns
por: Olthof, Anouk M., et al.
Publicado: (2019)

Variations of intronic branchpoint motif: identification and functional implications in splicing and disease
por: Xie, Jiuyong, et al.
Publicado: (2023)

In vivo analysis of Caenorhabditis elegans noncoding RNA promoter motifs
por: Li, Tiantian, et al.
Publicado: (2008)

Tissue-Specific Transcription Footprinting Using RNA PoI DamID (RAPID) in Caenorhabditis elegans
por: Gómez-Saldivar, Georgina, et al.
Publicado: (2020)

Overlapping splicing regulatory motifs—combinatorial effects on splicing
por: Goren, Amir, et al.
Publicado: (2010)

acr-23 Encodes a Monepantel-Sensitive Channel in Caenorhabditis elegans
por: Rufener, Lucien, et al.
Publicado: (2013)

A Fast and Specific Alignment Method for Minisatellite Maps
por: Bérard, Sèverine, et al.
Publicado: (2007)

The regulatory landscape of neurite development in Caenorhabditis elegans
por: Godini, Rasoul, et al.
Publicado: (2022)

Multiple Pathways Regulate Minisatellite Stability During Stationary Phase in Yeast
por: Kelly, Maire K., et al.
Publicado: (2012)

Alternative AKT2 splicing produces protein lacking the hydrophobic motif regulatory region
por: Plotz, Guido, et al.
Publicado: (2020)

Self-splicing of a group IIC intron: 5′ exon recognition and alternative 5′ splicing events implicate the stem–loop motif of a transcriptional terminator
por: Toor, Navtej, et al.
Publicado: (2006)

Intronic Alternative Splicing Regulators Identified by Comparative Genomics in Nematodes
por: Kabat, Jennifer L, et al.
Publicado: (2006)

Alternative splicing level related to intron size and organism complexity
por: Yang, Pengcheng, et al.
Publicado: (2021)

Discovery and Analysis of Evolutionarily Conserved Intronic Splicing Regulatory Elements
por: Yeo, Gene W, et al.
Publicado: (2007)

Functional selection and systematic analysis of intronic splicing elements identify active sequence motifs and associated splicing factors
por: Culler, Stephanie J., et al.
Publicado: (2010)

Control of Human PLP1 Expression Through Transcriptional Regulatory Elements and Alternatively Spliced Exons in Intron 1
por: Hamdan, Hamdan, et al.
Publicado: (2015)

Transcription factor binding to Caenorhabditis elegans first introns reveals lack of redundancy with gene promoters
por: Fuxman Bass, Juan I., et al.
Publicado: (2014)

Intronic motif pairs cooperate across exons to promote pre-mRNA splicing
por: Ke, Shengdong, et al.
Publicado: (2010)

Identification of DVA Interneuron Regulatory Sequences in Caenorhabditis elegans
por: Puckett Robinson, Carmie, et al.
Publicado: (2013)

Regulatory elements of Caenorhabditis elegans ribosomal protein genes
por: Sleumer, Monica C, et al.
Publicado: (2012)

A metabolic regulatory network for the Caenorhabditis elegans intestine
por: Bhattacharya, Sushila, et al.
Publicado: (2022)

Isolation of intragenic suppressor of tsp-15-splicing mutant in Caenorhabditis elegans
por: Moribe, Hiroki, et al.
Publicado: (2019)

Non-EST-based prediction of novel alternatively spliced cassette exons with cell signaling function in Caenorhabditis elegans and human
por: Leparc, German Gaston, et al.
Publicado: (2007)

Identification of cis-regulatory motifs in first introns and the prediction of intron-mediated enhancement of gene expression in Arabidopsis thaliana
por: Back, Georg, et al.
Publicado: (2021)

The combinatorial control of alternative splicing in C. elegans
por: Tan, June H., et al.
Publicado: (2017)

Global regulatory features of alternative splicing across tissues and within the nervous system of C. elegans
por: Koterniak, Bina, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_e2cbv4a5j3idcpitdbbfe6quh7