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Efficient Purging of Deleterious Mutations in Plants with Haploid Selfing

In diploid organisms, selfing reduces the efficiency of selection in removing deleterious mutations from a population. This need not be the case for all organisms. Some plants, for example, undergo an extreme form of selfing known as intragametophytic selfing, which immediately exposes all recessive...

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Autores principales: Szövényi, Péter, Devos, Nicolas, Weston, David J., Yang, Xiaohan, Hock, Zsófia, Shaw, Jonathan A., Shimizu, Kentaro K., McDaniel, Stuart F., Wagner, Andreas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041004/
https://www.ncbi.nlm.nih.gov/pubmed/24879432
http://dx.doi.org/10.1093/gbe/evu099
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author Szövényi, Péter
Devos, Nicolas
Weston, David J.
Yang, Xiaohan
Hock, Zsófia
Shaw, Jonathan A.
Shimizu, Kentaro K.
McDaniel, Stuart F.
Wagner, Andreas
author_facet Szövényi, Péter
Devos, Nicolas
Weston, David J.
Yang, Xiaohan
Hock, Zsófia
Shaw, Jonathan A.
Shimizu, Kentaro K.
McDaniel, Stuart F.
Wagner, Andreas
author_sort Szövényi, Péter
collection PubMed
description In diploid organisms, selfing reduces the efficiency of selection in removing deleterious mutations from a population. This need not be the case for all organisms. Some plants, for example, undergo an extreme form of selfing known as intragametophytic selfing, which immediately exposes all recessive deleterious mutations in a parental genome to selective purging. Here, we ask how effectively deleterious mutations are removed from such plants. Specifically, we study the extent to which deleterious mutations accumulate in a predominantly selfing and a predominantly outcrossing pair of moss species, using genome-wide transcriptome data. We find that the selfing species purge significantly more nonsynonymous mutations, as well as a greater proportion of radical amino acid changes which alter physicochemical properties of amino acids. Moreover, their purging of deleterious mutation is especially strong in conserved regions of protein-coding genes. Our observations show that selfing need not impede but can even accelerate the removal of deleterious mutations, and do so on a genome-wide scale.
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spelling pubmed-40410042014-06-02 Efficient Purging of Deleterious Mutations in Plants with Haploid Selfing Szövényi, Péter Devos, Nicolas Weston, David J. Yang, Xiaohan Hock, Zsófia Shaw, Jonathan A. Shimizu, Kentaro K. McDaniel, Stuart F. Wagner, Andreas Genome Biol Evol Research Article In diploid organisms, selfing reduces the efficiency of selection in removing deleterious mutations from a population. This need not be the case for all organisms. Some plants, for example, undergo an extreme form of selfing known as intragametophytic selfing, which immediately exposes all recessive deleterious mutations in a parental genome to selective purging. Here, we ask how effectively deleterious mutations are removed from such plants. Specifically, we study the extent to which deleterious mutations accumulate in a predominantly selfing and a predominantly outcrossing pair of moss species, using genome-wide transcriptome data. We find that the selfing species purge significantly more nonsynonymous mutations, as well as a greater proportion of radical amino acid changes which alter physicochemical properties of amino acids. Moreover, their purging of deleterious mutation is especially strong in conserved regions of protein-coding genes. Our observations show that selfing need not impede but can even accelerate the removal of deleterious mutations, and do so on a genome-wide scale. Oxford University Press 2014-05-14 /pmc/articles/PMC4041004/ /pubmed/24879432 http://dx.doi.org/10.1093/gbe/evu099 Text en © The Author(s) 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Research Article
Szövényi, Péter
Devos, Nicolas
Weston, David J.
Yang, Xiaohan
Hock, Zsófia
Shaw, Jonathan A.
Shimizu, Kentaro K.
McDaniel, Stuart F.
Wagner, Andreas
Efficient Purging of Deleterious Mutations in Plants with Haploid Selfing
title Efficient Purging of Deleterious Mutations in Plants with Haploid Selfing
title_full Efficient Purging of Deleterious Mutations in Plants with Haploid Selfing
title_fullStr Efficient Purging of Deleterious Mutations in Plants with Haploid Selfing
title_full_unstemmed Efficient Purging of Deleterious Mutations in Plants with Haploid Selfing
title_short Efficient Purging of Deleterious Mutations in Plants with Haploid Selfing
title_sort efficient purging of deleterious mutations in plants with haploid selfing
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041004/
https://www.ncbi.nlm.nih.gov/pubmed/24879432
http://dx.doi.org/10.1093/gbe/evu099
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