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Differences in Bacterial Community Structure on Hydrilla verticillata and Vallisneria americana in a Freshwater Spring
The phylogenetic composition of the epiphytic bacterial community of an invasive aquatic plant (Hydrilla verticillata) and a native species (Vallisneria americana [eelgrass]) of the Wakulla Spring (Florida) was investigated, along with the water column bacterial composition, using clone libraries of...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Japanese Society of Microbial Ecology/The Japanese Society of Soil Microbiology
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041241/ https://www.ncbi.nlm.nih.gov/pubmed/24553106 http://dx.doi.org/10.1264/jsme2.ME13064 |
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author | Gordon-Bradley, Nadine Lymperopoulou, Despoina S. Williams, Henry Neal |
author_facet | Gordon-Bradley, Nadine Lymperopoulou, Despoina S. Williams, Henry Neal |
author_sort | Gordon-Bradley, Nadine |
collection | PubMed |
description | The phylogenetic composition of the epiphytic bacterial community of an invasive aquatic plant (Hydrilla verticillata) and a native species (Vallisneria americana [eelgrass]) of the Wakulla Spring (Florida) was investigated, along with the water column bacterial composition, using clone libraries of the 16S rRNA genes. The bacterial clones from three clone libraries were classified into 182 operational taxonomic units (OTUs), most of which were affiliated with bacterial divisions commonly found in freshwater ecosystems. Based on the identified classes, the bacterial communities on eelgrass and Hydrilla were distinct, such that Planctomycetes, Cyanobacteria, Bacilli and Actinobacteria were found on eelgrass and in the water column but not on Hydrilla. On the other hand, Deltaproteobacteria and Verrucomicrobiae were found on Hydrilla and in the water column but not on eelgrass. Further distinctions observed were that Armatimonadia and Deinococci were found only on Hydrilla while Gemmatimonadetes was found only on eelgrass. Our results indicated differences between the epiphytic bacterial community on the two plants and the water column at the species level, but an even representation of the most abundant phylogenetic taxa (classes) in all three libraries was revealed. Statistical comparison of the retrieved sequences confirmed that the three libraries did not differ significantly at the community level (LIBSHUFF, p <0.05). |
format | Online Article Text |
id | pubmed-4041241 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Japanese Society of Microbial Ecology/The Japanese Society of Soil Microbiology |
record_format | MEDLINE/PubMed |
spelling | pubmed-40412412014-07-24 Differences in Bacterial Community Structure on Hydrilla verticillata and Vallisneria americana in a Freshwater Spring Gordon-Bradley, Nadine Lymperopoulou, Despoina S. Williams, Henry Neal Microbes Environ Articles The phylogenetic composition of the epiphytic bacterial community of an invasive aquatic plant (Hydrilla verticillata) and a native species (Vallisneria americana [eelgrass]) of the Wakulla Spring (Florida) was investigated, along with the water column bacterial composition, using clone libraries of the 16S rRNA genes. The bacterial clones from three clone libraries were classified into 182 operational taxonomic units (OTUs), most of which were affiliated with bacterial divisions commonly found in freshwater ecosystems. Based on the identified classes, the bacterial communities on eelgrass and Hydrilla were distinct, such that Planctomycetes, Cyanobacteria, Bacilli and Actinobacteria were found on eelgrass and in the water column but not on Hydrilla. On the other hand, Deltaproteobacteria and Verrucomicrobiae were found on Hydrilla and in the water column but not on eelgrass. Further distinctions observed were that Armatimonadia and Deinococci were found only on Hydrilla while Gemmatimonadetes was found only on eelgrass. Our results indicated differences between the epiphytic bacterial community on the two plants and the water column at the species level, but an even representation of the most abundant phylogenetic taxa (classes) in all three libraries was revealed. Statistical comparison of the retrieved sequences confirmed that the three libraries did not differ significantly at the community level (LIBSHUFF, p <0.05). Japanese Society of Microbial Ecology/The Japanese Society of Soil Microbiology 2014-03 2014-02-19 /pmc/articles/PMC4041241/ /pubmed/24553106 http://dx.doi.org/10.1264/jsme2.ME13064 Text en Copyright © 2014 by the Japanese Society of Microbial Ecology / the Japanese Society of Soil Microbiology http://creativecommons.org/licenses/by/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Gordon-Bradley, Nadine Lymperopoulou, Despoina S. Williams, Henry Neal Differences in Bacterial Community Structure on Hydrilla verticillata and Vallisneria americana in a Freshwater Spring |
title | Differences in Bacterial Community Structure on Hydrilla verticillata and Vallisneria americana in a Freshwater Spring |
title_full | Differences in Bacterial Community Structure on Hydrilla verticillata and Vallisneria americana in a Freshwater Spring |
title_fullStr | Differences in Bacterial Community Structure on Hydrilla verticillata and Vallisneria americana in a Freshwater Spring |
title_full_unstemmed | Differences in Bacterial Community Structure on Hydrilla verticillata and Vallisneria americana in a Freshwater Spring |
title_short | Differences in Bacterial Community Structure on Hydrilla verticillata and Vallisneria americana in a Freshwater Spring |
title_sort | differences in bacterial community structure on hydrilla verticillata and vallisneria americana in a freshwater spring |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041241/ https://www.ncbi.nlm.nih.gov/pubmed/24553106 http://dx.doi.org/10.1264/jsme2.ME13064 |
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