Cargando…

Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein

Instead of a classical single-stranded deoxyribonuleic acid (DNA)-binding protein (SSB), some hyperthermophilic crenarchaea harbor a non-canonical SSB termed ThermoDBP. Two related but poorly characterized groups of proteins, which share the ThermoDBP N-terminal DNA-binding domain, have a broader ph...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ghalei, Homa, von Moeller, Holger, Eppers, Detlef, Sohmen, Daniel, Wilson, Daniel N., Loll, Bernhard, Wahl, Markus C.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2014
Materias:	Structural Biology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041433/ https://www.ncbi.nlm.nih.gov/pubmed/24744237 http://dx.doi.org/10.1093/nar/gku259

Ejemplares similares

A skipping rope translocation mechanism in a widespread family of DNA repair helicases
por: Roske, Johann J, et al.
Publicado: (2020)

Structural basis for the function of SuhB as a transcription factor in ribosomal RNA synthesis
por: Huang, Yong-Heng, et al.
Publicado: (2019)

An intercalation-locked parallel-stranded DNA tetraplex
por: Tripathi, Shailesh, et al.
Publicado: (2015)

Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein
por: Ryzhikov, Mikhail, et al.
Publicado: (2011)

Euler buckling and nonlinear kinking of double-stranded DNA
por: Fields, Alexander P., et al.
Publicado: (2013)

Structural dynamics of double-stranded DNA with epigenome modification
por: Furukawa, Ayako, et al.
Publicado: (2020)

Distortion of double-stranded DNA structure by the binding of the restriction DNA glycosylase R.PabI
por: Miyazono, Ken-ichi, et al.
Publicado: (2020)

Double-strand DNA end-binding and sliding of the toroidal CRISPR-associated protein Csn2
por: Arslan, Zihni, et al.
Publicado: (2013)

Twisting of the DNA-binding surface by a β-strand-bearing proline modulates DNA gyrase activity
por: Hsieh, Tung-Ju, et al.
Publicado: (2010)

The crystal structure of a replicative hexameric helicase DnaC and its complex with single-stranded DNA
por: Lo, Yu-Hua, et al.
Publicado: (2009)

Structural transitions during the cooperative assembly of baculovirus single-stranded DNA-binding protein on ssDNA
por: Yin, Jiayi, et al.
Publicado: (2022)

Recognition of T-rich single-stranded DNA by the cold shock protein Bs-CspB in solution
por: Zeeb, Markus, et al.
Publicado: (2006)

Ctf18-RFC and DNA Pol ϵ form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication
por: Stokes, Katy, et al.
Publicado: (2020)

Electron attachment to DNA single strands: gas phase and aqueous solution
por: Gu, Jiande, et al.
Publicado: (2007)

Torsional regulation of hRPA-induced unwinding of double-stranded DNA
por: De Vlaminck, Iwijn, et al.
Publicado: (2010)

Structural basis for DNA strand separation by a hexameric replicative helicase
por: Chaban, Yuriy, et al.
Publicado: (2015)

Processing oxidatively damaged bases at DNA strand breaks by APE1
por: Whitaker, Amy M, et al.
Publicado: (2022)

Crystal structure of DnaT(84–153)-dT10 ssDNA complex reveals a novel single-stranded DNA binding mode
por: Liu, Zheng, et al.
Publicado: (2014)

Deciphering ion transport and ATPase coupling in the intersubunit tunnel of KdpFABC
por: Silberberg, Jakob M., et al.
Publicado: (2021)

A Snu114–GTP–Prp8 module forms a relay station for efficient splicing in yeast
por: Jia, Junqiao, et al.
Publicado: (2020)

Transition dynamics and selection of the distinct S-DNA and strand unpeeling modes of double helix overstretching
por: Fu, Hongxia, et al.
Publicado: (2011)

The stringent factor RelA adopts an open conformation on the ribosome to stimulate ppGpp synthesis
por: Arenz, Stefan, et al.
Publicado: (2016)

NMR-based method of small changes reveals how DNA mutator APOBEC3A interacts with its single-stranded DNA substrate
por: Harjes, Stefan, et al.
Publicado: (2017)

Recognition and processing of double-stranded DNA by ExoX, a distributive 3′–5′ exonuclease
por: Wang, Tianyu, et al.
Publicado: (2013)

Elastic properties and secondary structure formation of single-stranded DNA at monovalent and divalent salt conditions
por: Bosco, Alessandro, et al.
Publicado: (2014)

The structure of DdrB from Deinococcus: a new fold for single-stranded DNA binding proteins
por: Sugiman-Marangos, Seiji, et al.
Publicado: (2010)

Molecular crowding creates an essential environment for the formation of stable G-quadruplexes in long double-stranded DNA
por: Zheng, Ke-wei, et al.
Publicado: (2010)

Structural dynamics of E. coli single-stranded DNA binding protein reveal DNA wrapping and unwrapping pathways
por: Suksombat, Sukrit, et al.
Publicado: (2015)

Controlling the stoichiometry and strand polarity of a tetramolecular G-quadruplex structure by using a DNA origami frame
por: Rajendran, Arivazhagan, et al.
Publicado: (2013)

The HRP3 PWWP domain recognizes the minor groove of double-stranded DNA and recruits HRP3 to chromatin
por: Tian, Wei, et al.
Publicado: (2019)

Molecular basis of abasic site sensing in single-stranded DNA by the SRAP domain of E. coli yedK
por: Wang, Na, et al.
Publicado: (2019)

Structure of mycobacterial 3′-to-5′ RNA:DNA helicase Lhr bound to a ssDNA tracking strand highlights distinctive features of a novel family of bacterial helicases
por: Ejaz, Anam, et al.
Publicado: (2018)

3D structure of Thermus aquaticus single-stranded DNA–binding protein gives insight into the functioning of SSB proteins
por: Fedorov, Roman, et al.
Publicado: (2006)

Crystal structure of the EndoG/EndoGI complex: mechanism of EndoG inhibition
por: Loll, Bernhard, et al.
Publicado: (2009)

Structures of apo- and ssDNA-bound YdbC from Lactococcus lactis uncover the function of protein domain family DUF2128 and expand the single-stranded DNA-binding domain proteome
por: Rossi, Paolo, et al.
Publicado: (2013)

Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine
por: Renciuk, Daniel, et al.
Publicado: (2013)

DNA replication initiation in Bacillus subtilis: structural and functional characterization of the essential DnaA–DnaD interaction
por: Martin, Eleyna, et al.
Publicado: (2019)

Complexed crystal structure of replication restart primosome protein PriB reveals a novel single-stranded DNA-binding mode
por: Huang, Cheng-Yang, et al.
Publicado: (2006)

Temperature-induced melting of double-stranded DNA in the absence and presence of covalently bonded antitumour drugs: insight from molecular dynamics simulations
por: Bueren-Calabuig, Juan A., et al.
Publicado: (2011)

Intramolecular binding mode of the C-terminus of Escherichia coli single-stranded DNA binding protein determined by nuclear magnetic resonance spectroscopy
por: Shishmarev, Dmitry, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_69uln7p2g56es1pc3hhamkuamb