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Insulin Resistance: Regression and Clustering
In this paper we try to define insulin resistance (IR) precisely for a group of Chinese women. Our definition deliberately does not depend upon body mass index (BMI) or age, although in other studies, with particular random effects models quite different from models used here, BMI accounts for a lar...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041565/ https://www.ncbi.nlm.nih.gov/pubmed/24887437 http://dx.doi.org/10.1371/journal.pone.0094129 |
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author | Yoon, Sangho Assimes, Themistocles L. Quertermous, Thomas Hsiao, Chin-Fu Chuang, Lee-Ming Hwu, Chii-Min Rajaratnam, Bala Olshen, Richard A. |
author_facet | Yoon, Sangho Assimes, Themistocles L. Quertermous, Thomas Hsiao, Chin-Fu Chuang, Lee-Ming Hwu, Chii-Min Rajaratnam, Bala Olshen, Richard A. |
author_sort | Yoon, Sangho |
collection | PubMed |
description | In this paper we try to define insulin resistance (IR) precisely for a group of Chinese women. Our definition deliberately does not depend upon body mass index (BMI) or age, although in other studies, with particular random effects models quite different from models used here, BMI accounts for a large part of the variability in IR. We accomplish our goal through application of Gauss mixture vector quantization (GMVQ), a technique for clustering that was developed for application to lossy data compression. Defining data come from measurements that play major roles in medical practice. A precise statement of what the data are is in Section 1. Their family structures are described in detail. They concern levels of lipids and the results of an oral glucose tolerance test (OGTT). We apply GMVQ to residuals obtained from regressions of outcomes of an OGTT and lipids on functions of age and BMI that are inferred from the data. A bootstrap procedure developed for our family data supplemented by insights from other approaches leads us to believe that two clusters are appropriate for defining IR precisely. One cluster consists of women who are IR, and the other of women who seem not to be. Genes and other features are used to predict cluster membership. We argue that prediction with “main effects” is not satisfactory, but prediction that includes interactions may be. |
format | Online Article Text |
id | pubmed-4041565 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-40415652014-06-09 Insulin Resistance: Regression and Clustering Yoon, Sangho Assimes, Themistocles L. Quertermous, Thomas Hsiao, Chin-Fu Chuang, Lee-Ming Hwu, Chii-Min Rajaratnam, Bala Olshen, Richard A. PLoS One Research Article In this paper we try to define insulin resistance (IR) precisely for a group of Chinese women. Our definition deliberately does not depend upon body mass index (BMI) or age, although in other studies, with particular random effects models quite different from models used here, BMI accounts for a large part of the variability in IR. We accomplish our goal through application of Gauss mixture vector quantization (GMVQ), a technique for clustering that was developed for application to lossy data compression. Defining data come from measurements that play major roles in medical practice. A precise statement of what the data are is in Section 1. Their family structures are described in detail. They concern levels of lipids and the results of an oral glucose tolerance test (OGTT). We apply GMVQ to residuals obtained from regressions of outcomes of an OGTT and lipids on functions of age and BMI that are inferred from the data. A bootstrap procedure developed for our family data supplemented by insights from other approaches leads us to believe that two clusters are appropriate for defining IR precisely. One cluster consists of women who are IR, and the other of women who seem not to be. Genes and other features are used to predict cluster membership. We argue that prediction with “main effects” is not satisfactory, but prediction that includes interactions may be. Public Library of Science 2014-06-02 /pmc/articles/PMC4041565/ /pubmed/24887437 http://dx.doi.org/10.1371/journal.pone.0094129 Text en © 2014 Yoon et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Yoon, Sangho Assimes, Themistocles L. Quertermous, Thomas Hsiao, Chin-Fu Chuang, Lee-Ming Hwu, Chii-Min Rajaratnam, Bala Olshen, Richard A. Insulin Resistance: Regression and Clustering |
title | Insulin Resistance: Regression and Clustering |
title_full | Insulin Resistance: Regression and Clustering |
title_fullStr | Insulin Resistance: Regression and Clustering |
title_full_unstemmed | Insulin Resistance: Regression and Clustering |
title_short | Insulin Resistance: Regression and Clustering |
title_sort | insulin resistance: regression and clustering |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041565/ https://www.ncbi.nlm.nih.gov/pubmed/24887437 http://dx.doi.org/10.1371/journal.pone.0094129 |
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