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Advancing Bag-of-Visual-Words Representations for Lesion Classification in Retinal Images

Diabetic Retinopathy (DR) is a complication of diabetes that can lead to blindness if not readily discovered. Automated screening algorithms have the potential to improve identification of patients who need further medical attention. However, the identification of lesions must be accurate to be usef...

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Autores principales: Pires, Ramon, Jelinek, Herbert F., Wainer, Jacques, Valle, Eduardo, Rocha, Anderson
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041723/
https://www.ncbi.nlm.nih.gov/pubmed/24886780
http://dx.doi.org/10.1371/journal.pone.0096814
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author Pires, Ramon
Jelinek, Herbert F.
Wainer, Jacques
Valle, Eduardo
Rocha, Anderson
author_facet Pires, Ramon
Jelinek, Herbert F.
Wainer, Jacques
Valle, Eduardo
Rocha, Anderson
author_sort Pires, Ramon
collection PubMed
description Diabetic Retinopathy (DR) is a complication of diabetes that can lead to blindness if not readily discovered. Automated screening algorithms have the potential to improve identification of patients who need further medical attention. However, the identification of lesions must be accurate to be useful for clinical application. The bag-of-visual-words (BoVW) algorithm employs a maximum-margin classifier in a flexible framework that is able to detect the most common DR-related lesions such as microaneurysms, cotton-wool spots and hard exudates. BoVW allows to bypass the need for pre- and post-processing of the retinographic images, as well as the need of specific ad hoc techniques for identification of each type of lesion. An extensive evaluation of the BoVW model, using three large retinograph datasets (DR1, DR2 and Messidor) with different resolution and collected by different healthcare personnel, was performed. The results demonstrate that the BoVW classification approach can identify different lesions within an image without having to utilize different algorithms for each lesion reducing processing time and providing a more flexible diagnostic system. Our BoVW scheme is based on sparse low-level feature detection with a Speeded-Up Robust Features (SURF) local descriptor, and mid-level features based on semi-soft coding with max pooling. The best BoVW representation for retinal image classification was an area under the receiver operating characteristic curve (AUC-ROC) of 97.8% (exudates) and 93.5% (red lesions), applying a cross-dataset validation protocol. To assess the accuracy for detecting cases that require referral within one year, the sparse extraction technique associated with semi-soft coding and max pooling obtained an AUC of 94.2[Image: see text]2.0%, outperforming current methods. Those results indicate that, for retinal image classification tasks in clinical practice, BoVW is equal and, in some instances, surpasses results obtained using dense detection (widely believed to be the best choice in many vision problems) for the low-level descriptors.
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spelling pubmed-40417232014-06-09 Advancing Bag-of-Visual-Words Representations for Lesion Classification in Retinal Images Pires, Ramon Jelinek, Herbert F. Wainer, Jacques Valle, Eduardo Rocha, Anderson PLoS One Research Article Diabetic Retinopathy (DR) is a complication of diabetes that can lead to blindness if not readily discovered. Automated screening algorithms have the potential to improve identification of patients who need further medical attention. However, the identification of lesions must be accurate to be useful for clinical application. The bag-of-visual-words (BoVW) algorithm employs a maximum-margin classifier in a flexible framework that is able to detect the most common DR-related lesions such as microaneurysms, cotton-wool spots and hard exudates. BoVW allows to bypass the need for pre- and post-processing of the retinographic images, as well as the need of specific ad hoc techniques for identification of each type of lesion. An extensive evaluation of the BoVW model, using three large retinograph datasets (DR1, DR2 and Messidor) with different resolution and collected by different healthcare personnel, was performed. The results demonstrate that the BoVW classification approach can identify different lesions within an image without having to utilize different algorithms for each lesion reducing processing time and providing a more flexible diagnostic system. Our BoVW scheme is based on sparse low-level feature detection with a Speeded-Up Robust Features (SURF) local descriptor, and mid-level features based on semi-soft coding with max pooling. The best BoVW representation for retinal image classification was an area under the receiver operating characteristic curve (AUC-ROC) of 97.8% (exudates) and 93.5% (red lesions), applying a cross-dataset validation protocol. To assess the accuracy for detecting cases that require referral within one year, the sparse extraction technique associated with semi-soft coding and max pooling obtained an AUC of 94.2[Image: see text]2.0%, outperforming current methods. Those results indicate that, for retinal image classification tasks in clinical practice, BoVW is equal and, in some instances, surpasses results obtained using dense detection (widely believed to be the best choice in many vision problems) for the low-level descriptors. Public Library of Science 2014-06-02 /pmc/articles/PMC4041723/ /pubmed/24886780 http://dx.doi.org/10.1371/journal.pone.0096814 Text en © 2014 Pires et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Pires, Ramon
Jelinek, Herbert F.
Wainer, Jacques
Valle, Eduardo
Rocha, Anderson
Advancing Bag-of-Visual-Words Representations for Lesion Classification in Retinal Images
title Advancing Bag-of-Visual-Words Representations for Lesion Classification in Retinal Images
title_full Advancing Bag-of-Visual-Words Representations for Lesion Classification in Retinal Images
title_fullStr Advancing Bag-of-Visual-Words Representations for Lesion Classification in Retinal Images
title_full_unstemmed Advancing Bag-of-Visual-Words Representations for Lesion Classification in Retinal Images
title_short Advancing Bag-of-Visual-Words Representations for Lesion Classification in Retinal Images
title_sort advancing bag-of-visual-words representations for lesion classification in retinal images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4041723/
https://www.ncbi.nlm.nih.gov/pubmed/24886780
http://dx.doi.org/10.1371/journal.pone.0096814
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