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Automatic Detection of Regions in Spinach Canopies Responding to Soil Moisture Deficit Using Combined Visible and Thermal Imagery

Thermal imaging has been used in the past for remote detection of regions of canopy showing symptoms of stress, including water deficit stress. Stress indices derived from thermal images have been used as an indicator of canopy water status, but these depend on the choice of reference surfaces and e...

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Autores principales: Raza, Shan-e-Ahmed, Smith, Hazel K., Clarkson, Graham J. J., Taylor, Gail, Thompson, Andrew J., Clarkson, John, Rajpoot, Nasir M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4043671/
https://www.ncbi.nlm.nih.gov/pubmed/24892284
http://dx.doi.org/10.1371/journal.pone.0097612
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author Raza, Shan-e-Ahmed
Smith, Hazel K.
Clarkson, Graham J. J.
Taylor, Gail
Thompson, Andrew J.
Clarkson, John
Rajpoot, Nasir M.
author_facet Raza, Shan-e-Ahmed
Smith, Hazel K.
Clarkson, Graham J. J.
Taylor, Gail
Thompson, Andrew J.
Clarkson, John
Rajpoot, Nasir M.
author_sort Raza, Shan-e-Ahmed
collection PubMed
description Thermal imaging has been used in the past for remote detection of regions of canopy showing symptoms of stress, including water deficit stress. Stress indices derived from thermal images have been used as an indicator of canopy water status, but these depend on the choice of reference surfaces and environmental conditions and can be confounded by variations in complex canopy structure. Therefore, in this work, instead of using stress indices, information from thermal and visible light imagery was combined along with machine learning techniques to identify regions of canopy showing a response to soil water deficit. Thermal and visible light images of a spinach canopy with different levels of soil moisture were captured. Statistical measurements from these images were extracted and used to classify between canopies growing in well-watered soil or under soil moisture deficit using Support Vector Machines (SVM) and Gaussian Processes Classifier (GPC) and a combination of both the classifiers. The classification results show a high correlation with soil moisture. We demonstrate that regions of a spinach crop responding to soil water deficit can be identified by using machine learning techniques with a high accuracy of 97%. This method could, in principle, be applied to any crop at a range of scales.
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spelling pubmed-40436712014-06-09 Automatic Detection of Regions in Spinach Canopies Responding to Soil Moisture Deficit Using Combined Visible and Thermal Imagery Raza, Shan-e-Ahmed Smith, Hazel K. Clarkson, Graham J. J. Taylor, Gail Thompson, Andrew J. Clarkson, John Rajpoot, Nasir M. PLoS One Research Article Thermal imaging has been used in the past for remote detection of regions of canopy showing symptoms of stress, including water deficit stress. Stress indices derived from thermal images have been used as an indicator of canopy water status, but these depend on the choice of reference surfaces and environmental conditions and can be confounded by variations in complex canopy structure. Therefore, in this work, instead of using stress indices, information from thermal and visible light imagery was combined along with machine learning techniques to identify regions of canopy showing a response to soil water deficit. Thermal and visible light images of a spinach canopy with different levels of soil moisture were captured. Statistical measurements from these images were extracted and used to classify between canopies growing in well-watered soil or under soil moisture deficit using Support Vector Machines (SVM) and Gaussian Processes Classifier (GPC) and a combination of both the classifiers. The classification results show a high correlation with soil moisture. We demonstrate that regions of a spinach crop responding to soil water deficit can be identified by using machine learning techniques with a high accuracy of 97%. This method could, in principle, be applied to any crop at a range of scales. Public Library of Science 2014-06-03 /pmc/articles/PMC4043671/ /pubmed/24892284 http://dx.doi.org/10.1371/journal.pone.0097612 Text en © 2014 Raza et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Raza, Shan-e-Ahmed
Smith, Hazel K.
Clarkson, Graham J. J.
Taylor, Gail
Thompson, Andrew J.
Clarkson, John
Rajpoot, Nasir M.
Automatic Detection of Regions in Spinach Canopies Responding to Soil Moisture Deficit Using Combined Visible and Thermal Imagery
title Automatic Detection of Regions in Spinach Canopies Responding to Soil Moisture Deficit Using Combined Visible and Thermal Imagery
title_full Automatic Detection of Regions in Spinach Canopies Responding to Soil Moisture Deficit Using Combined Visible and Thermal Imagery
title_fullStr Automatic Detection of Regions in Spinach Canopies Responding to Soil Moisture Deficit Using Combined Visible and Thermal Imagery
title_full_unstemmed Automatic Detection of Regions in Spinach Canopies Responding to Soil Moisture Deficit Using Combined Visible and Thermal Imagery
title_short Automatic Detection of Regions in Spinach Canopies Responding to Soil Moisture Deficit Using Combined Visible and Thermal Imagery
title_sort automatic detection of regions in spinach canopies responding to soil moisture deficit using combined visible and thermal imagery
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4043671/
https://www.ncbi.nlm.nih.gov/pubmed/24892284
http://dx.doi.org/10.1371/journal.pone.0097612
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