Cargando…

Whole genome resequencing in tomato reveals variation associated with introgression and breeding events

BACKGROUND: One of the goals of genomics is to identify the genetic loci responsible for variation in phenotypic traits. The completion of the tomato genome sequence and recent advances in DNA sequencing technology allow for in-depth characterization of genetic variation present in the tomato genome...

Descripción completa

Detalles Bibliográficos
Autores principales:	Causse, Mathilde, Desplat, Nelly, Pascual, Laura, Le Paslier, Marie-Christine, Sauvage, Christopher, Bauchet, Guillaume, Bérard, Aurélie, Bounon, Rémi, Tchoumakov, Maria, Brunel, Dominique, Bouchet, Jean-Paul
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2013
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4046683/ https://www.ncbi.nlm.nih.gov/pubmed/24228636 http://dx.doi.org/10.1186/1471-2164-14-791

Ejemplares similares

Genome-Wide Association Mapping in Tomato (Solanum lycopersicum) Is Possible Using Genome Admixture of Solanum lycopersicum var. cerasiforme
por: Ranc, Nicolas, et al.
Publicado: (2012)

Genomic variation in tomato, from wild ancestors to contemporary breeding accessions
por: Blanca, José, et al.
Publicado: (2015)

Genes involved in floral meristem in tomato exhibit drastically reduced genetic diversity and signature of selection
por: Bauchet, Guillaume, et al.
Publicado: (2014)

Genome Sequences of Populus tremula Chloroplast and Mitochondrion: Implications for Holistic Poplar Breeding
por: Kersten, Birgit, et al.
Publicado: (2016)

Meta-analysis of genome-wide association studies provides insights into genetic control of tomato flavor
por: Zhao, Jiantao, et al.
Publicado: (2019)

Identification of growth processes involved in QTLs for tomato fruit size and composition
por: Bertin, Nadia, et al.
Publicado: (2009)

Combining ecophysiological modelling and quantitative trait locus analysis to identify key elementary processes underlying tomato fruit sugar concentration
por: Prudent, Marion, et al.
Publicado: (2011)

Breeding Tomato Hybrids for Flavour: Comparison of GWAS Results Obtained on Lines and F1 Hybrids
por: Bineau, Estelle, et al.
Publicado: (2021)

Quick and efficient approach to develop genomic resources in orphan species: Application in Lavandula angustifolia
por: Fopa Fomeju, Berline, et al.
Publicado: (2020)

Water Deficit and Salinity Stress Reveal Many Specific QTL for Plant Growth and Fruit Quality Traits in Tomato
por: Diouf, Isidore A., et al.
Publicado: (2018)

Editorial: Introgression Breeding in Cultivated Plants
por: Gramazio, Pietro, et al.
Publicado: (2021)

Sequence imputation from low density single nucleotide polymorphism panel in a black poplar breeding population
por: Pégard, Marie, et al.
Publicado: (2019)

Deciphering genetic diversity and inheritance of tomato fruit weight and composition through a systems biology approach
por: Pascual, Laura, et al.
Publicado: (2013)

Patterns of sequence polymorphism in the fleshless berry locus in cultivated and wild Vitis vinifera accessions
por: Houel, Cléa, et al.
Publicado: (2010)

Introgression Breeding in Barley: Perspectives and Case Studies
por: Hernandez, Javier, et al.
Publicado: (2020)

The Resurgence of Introgression Breeding, as Exemplified in Wheat Improvement
por: Hao, Ming, et al.
Publicado: (2020)

Current Perspectives on Introgression Breeding in Food Legumes
por: Pratap, Aditya, et al.
Publicado: (2021)

Model-Assisted Estimation of the Genetic Variability in Physiological Parameters Related to Tomato Fruit Growth under Contrasted Water Conditions
por: Constantinescu, Dario, et al.
Publicado: (2016)

A clarified position for solanum lycopersicum var. cerasiforme in the evolutionary history of tomatoes (solanaceae)
por: Ranc, Nicolas, et al.
Publicado: (2008)

Whole-genome resequencing of common bean elite breeding lines
por: de Souza, Isabela Pavanelli, et al.
Publicado: (2023)

Introgression Breeding in Cowpea [Vigna unguiculata (L.) Walp.]
por: Boukar, Ousmane, et al.
Publicado: (2020)

Whole-genome resequencing reveals world-wide ancestry and adaptive introgression events of domesticated cattle in East Asia
por: Chen, Ningbo, et al.
Publicado: (2018)

Whole-Genome Resequencing of Worldwide Wild and Domestic Sheep Elucidates Genetic Diversity, Introgression, and Agronomically Important Loci
por: Lv, Feng-Hua, et al.
Publicado: (2021)

Introgression shapes fruit color convergence in invasive Galápagos tomato
por: Gibson, Matthew JS, et al.
Publicado: (2021)

Evidence of cryptic introgression in tomato (Solanum lycopersicum L.) based on wild tomato species alleles
por: Labate, Joanne A, et al.
Publicado: (2012)

Genome resequencing reveals independent domestication and breeding improvement of naked oat
por: Nan, Jinsheng, et al.
Publicado: (2023)

Low-coverage resequencing detects meiotic recombination pattern and features in tomato RILs
por: de Haas, Lars S, et al.
Publicado: (2017)

Discovery and mapping of a new expressed sequence tag-single nucleotide polymorphism and simple sequence repeat panel for large-scale genetic studies and breeding of Theobroma cacao L.
por: Allegre, Mathilde, et al.
Publicado: (2012)

SNP-markers in Allium species to facilitate introgression breeding in onion
por: Scholten, Olga E., et al.
Publicado: (2016)

Genome sequence of Gossypium anomalum facilitates interspecific introgression breeding
por: Xu, Zhenzhen, et al.
Publicado: (2022)

Analysis of wild-species introgressions in tomato inbreds uncovers ancestral origins
por: Menda, Naama, et al.
Publicado: (2014)

Genetic diversity and selection of Tibetan sheep breeds revealed by whole-genome resequencing
por: Tian, Dehong, et al.
Publicado: (2023)

Simulation of introgression of the POLLED allele into the Jersey breed via conventional breeding vs. gene editing
por: Mueller, Maci L, et al.
Publicado: (2018)

Genetic and physiological analysis of tomato fruit weight and composition: influence of carbon availability on QTL detection
por: Prudent, Marion, et al.
Publicado: (2009)

A new version of the grapevine reference genome assembly (12X.v2) and of its annotation (VCost.v3)
por: Canaguier, A., et al.
Publicado: (2017)

Association mapping reveals the genetic architecture of tomato response to water deficit: focus on major fruit quality traits
por: Albert, Elise, et al.
Publicado: (2016)

Whole-genome resequencing analyses of five pig breeds, including Korean wild and native, and three European origin breeds
por: Choi, Jung-Woo, et al.
Publicado: (2015)

Human-Mediated Introgression of Haplotypes in a Modern Dairy Cattle Breed
por: Zhang, Qianqian, et al.
Publicado: (2018)

Widespread introgression in Chinese indigenous chicken breeds from commercial broiler
por: Zhang, Chunyuan, et al.
Publicado: (2019)

Genetic basis of phenotypic plasticity and genotype × environment interactions in a multi-parental tomato population
por: Diouf, Isidore, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_9qiihc8jla8coe9e0ittategaj