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Adaptive Bacteria Colony Picking in Unstructured Environments Using Intensity Histogram and Unascertained LS-SVM Classifier

Features analysis is an important task which can significantly affect the performance of automatic bacteria colony picking. Unstructured environments also affect the automatic colony screening. This paper presents a novel approach for adaptive colony segmentation in unstructured environments by trea...

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Detalles Bibliográficos
Autores principales: Zhang, Kun, Fei, Minrui, Li, Xin, Zhou, Huiyu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4052681/
https://www.ncbi.nlm.nih.gov/pubmed/24955423
http://dx.doi.org/10.1155/2014/928395
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author Zhang, Kun
Fei, Minrui
Li, Xin
Zhou, Huiyu
author_facet Zhang, Kun
Fei, Minrui
Li, Xin
Zhou, Huiyu
author_sort Zhang, Kun
collection PubMed
description Features analysis is an important task which can significantly affect the performance of automatic bacteria colony picking. Unstructured environments also affect the automatic colony screening. This paper presents a novel approach for adaptive colony segmentation in unstructured environments by treating the detected peaks of intensity histograms as a morphological feature of images. In order to avoid disturbing peaks, an entropy based mean shift filter is introduced to smooth images as a preprocessing step. The relevance and importance of these features can be determined in an improved support vector machine classifier using unascertained least square estimation. Experimental results show that the proposed unascertained least square support vector machine (ULSSVM) has better recognition accuracy than the other state-of-the-art techniques, and its training process takes less time than most of the traditional approaches presented in this paper.
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spelling pubmed-40526812014-06-22 Adaptive Bacteria Colony Picking in Unstructured Environments Using Intensity Histogram and Unascertained LS-SVM Classifier Zhang, Kun Fei, Minrui Li, Xin Zhou, Huiyu ScientificWorldJournal Research Article Features analysis is an important task which can significantly affect the performance of automatic bacteria colony picking. Unstructured environments also affect the automatic colony screening. This paper presents a novel approach for adaptive colony segmentation in unstructured environments by treating the detected peaks of intensity histograms as a morphological feature of images. In order to avoid disturbing peaks, an entropy based mean shift filter is introduced to smooth images as a preprocessing step. The relevance and importance of these features can be determined in an improved support vector machine classifier using unascertained least square estimation. Experimental results show that the proposed unascertained least square support vector machine (ULSSVM) has better recognition accuracy than the other state-of-the-art techniques, and its training process takes less time than most of the traditional approaches presented in this paper. Hindawi Publishing Corporation 2014 2014-05-12 /pmc/articles/PMC4052681/ /pubmed/24955423 http://dx.doi.org/10.1155/2014/928395 Text en Copyright © 2014 Kun Zhang et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhang, Kun
Fei, Minrui
Li, Xin
Zhou, Huiyu
Adaptive Bacteria Colony Picking in Unstructured Environments Using Intensity Histogram and Unascertained LS-SVM Classifier
title Adaptive Bacteria Colony Picking in Unstructured Environments Using Intensity Histogram and Unascertained LS-SVM Classifier
title_full Adaptive Bacteria Colony Picking in Unstructured Environments Using Intensity Histogram and Unascertained LS-SVM Classifier
title_fullStr Adaptive Bacteria Colony Picking in Unstructured Environments Using Intensity Histogram and Unascertained LS-SVM Classifier
title_full_unstemmed Adaptive Bacteria Colony Picking in Unstructured Environments Using Intensity Histogram and Unascertained LS-SVM Classifier
title_short Adaptive Bacteria Colony Picking in Unstructured Environments Using Intensity Histogram and Unascertained LS-SVM Classifier
title_sort adaptive bacteria colony picking in unstructured environments using intensity histogram and unascertained ls-svm classifier
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4052681/
https://www.ncbi.nlm.nih.gov/pubmed/24955423
http://dx.doi.org/10.1155/2014/928395
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