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The Transmembrane Helix Tilt May Be Determined by the Balance between Precession Entropy and Lipid Perturbation

Hydrophobic helical peptides interact with lipid bilayers in various modes, determined by the match between the length of the helix’s hydrophobic core and the thickness of the hydrocarbon region of the bilayer. For example, long helices may tilt with respect to the membrane normal to bury their hydr...

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Autores principales: Gofman, Yana, Haliloglu, Turkan, Ben-Tal, Nir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2012
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4053537/
https://www.ncbi.nlm.nih.gov/pubmed/24932138
http://dx.doi.org/10.1021/ct300128x
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author Gofman, Yana
Haliloglu, Turkan
Ben-Tal, Nir
author_facet Gofman, Yana
Haliloglu, Turkan
Ben-Tal, Nir
author_sort Gofman, Yana
collection PubMed
description Hydrophobic helical peptides interact with lipid bilayers in various modes, determined by the match between the length of the helix’s hydrophobic core and the thickness of the hydrocarbon region of the bilayer. For example, long helices may tilt with respect to the membrane normal to bury their hydrophobic cores in the membrane, and the lipid bilayer may stretch to match the helix length. Recent molecular dynamics simulations and potential of mean force calculations have shown that some TM helices whose lengths are equal to, or even shorter than, the bilayer thickness may also tilt. The tilt is driven by a gain in the helix precession entropy, which compensates for the free energy penalty resulting from membrane deformation. Using this free energy balance, we derived theoretically an equation of state, describing the dependence of the tilt on the helix length and membrane thickness. To this end, we conducted coarse-grained Monte Carlo simulations of the interaction of helices of various lengths with lipid bilayers of various thicknesses, reproducing and expanding the previous molecular dynamics simulations. Insight from the simulations facilitated the derivation of the theoretical model. The tilt angles calculated using the theoretical model agree well with our simulations and with previous calculations and measurements.
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spelling pubmed-40535372014-06-12 The Transmembrane Helix Tilt May Be Determined by the Balance between Precession Entropy and Lipid Perturbation Gofman, Yana Haliloglu, Turkan Ben-Tal, Nir J Chem Theory Comput Hydrophobic helical peptides interact with lipid bilayers in various modes, determined by the match between the length of the helix’s hydrophobic core and the thickness of the hydrocarbon region of the bilayer. For example, long helices may tilt with respect to the membrane normal to bury their hydrophobic cores in the membrane, and the lipid bilayer may stretch to match the helix length. Recent molecular dynamics simulations and potential of mean force calculations have shown that some TM helices whose lengths are equal to, or even shorter than, the bilayer thickness may also tilt. The tilt is driven by a gain in the helix precession entropy, which compensates for the free energy penalty resulting from membrane deformation. Using this free energy balance, we derived theoretically an equation of state, describing the dependence of the tilt on the helix length and membrane thickness. To this end, we conducted coarse-grained Monte Carlo simulations of the interaction of helices of various lengths with lipid bilayers of various thicknesses, reproducing and expanding the previous molecular dynamics simulations. Insight from the simulations facilitated the derivation of the theoretical model. The tilt angles calculated using the theoretical model agree well with our simulations and with previous calculations and measurements. American Chemical Society 2012-06-06 2012-08-14 /pmc/articles/PMC4053537/ /pubmed/24932138 http://dx.doi.org/10.1021/ct300128x Text en Copyright © 2012 American Chemical Society Terms of Use (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html)
spellingShingle Gofman, Yana
Haliloglu, Turkan
Ben-Tal, Nir
The Transmembrane Helix Tilt May Be Determined by the Balance between Precession Entropy and Lipid Perturbation
title The Transmembrane Helix Tilt May Be Determined by the Balance between Precession Entropy and Lipid Perturbation
title_full The Transmembrane Helix Tilt May Be Determined by the Balance between Precession Entropy and Lipid Perturbation
title_fullStr The Transmembrane Helix Tilt May Be Determined by the Balance between Precession Entropy and Lipid Perturbation
title_full_unstemmed The Transmembrane Helix Tilt May Be Determined by the Balance between Precession Entropy and Lipid Perturbation
title_short The Transmembrane Helix Tilt May Be Determined by the Balance between Precession Entropy and Lipid Perturbation
title_sort transmembrane helix tilt may be determined by the balance between precession entropy and lipid perturbation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4053537/
https://www.ncbi.nlm.nih.gov/pubmed/24932138
http://dx.doi.org/10.1021/ct300128x
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