Cargando…

Longitudinal deformation models, spatial regularizations and learning strategies to quantify Alzheimer's disease progression

In the context of Alzheimer's disease, two challenging issues are (1) the characterization of local hippocampal shape changes specific to disease progression and (2) the identification of mild-cognitive impairment patients likely to convert. In the literature, (1) is usually solved first to det...

Descripción completa

Detalles Bibliográficos
Autores principales: Fiot, Jean-Baptiste, Raguet, Hugo, Risser, Laurent, Cohen, Laurent D., Fripp, Jurgen, Vialard, François-Xavier
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4053641/
https://www.ncbi.nlm.nih.gov/pubmed/24936423
http://dx.doi.org/10.1016/j.nicl.2014.02.002
_version_ 1782320409529548800
author Fiot, Jean-Baptiste
Raguet, Hugo
Risser, Laurent
Cohen, Laurent D.
Fripp, Jurgen
Vialard, François-Xavier
author_facet Fiot, Jean-Baptiste
Raguet, Hugo
Risser, Laurent
Cohen, Laurent D.
Fripp, Jurgen
Vialard, François-Xavier
author_sort Fiot, Jean-Baptiste
collection PubMed
description In the context of Alzheimer's disease, two challenging issues are (1) the characterization of local hippocampal shape changes specific to disease progression and (2) the identification of mild-cognitive impairment patients likely to convert. In the literature, (1) is usually solved first to detect areas potentially related to the disease. These areas are then considered as an input to solve (2). As an alternative to this sequential strategy, we investigate the use of a classification model using logistic regression to address both issues (1) and (2) simultaneously. The classification of the patients therefore does not require any a priori definition of the most representative hippocampal areas potentially related to the disease, as they are automatically detected. We first quantify deformations of patients' hippocampi between two time points using the large deformations by diffeomorphisms framework and transport these deformations to a common template. Since the deformations are expected to be spatially structured, we perform classification combining logistic loss and spatial regularization techniques, which have not been explored so far in this context, as far as we know. The main contribution of this paper is the comparison of regularization techniques enforcing the coefficient maps to be spatially smooth (Sobolev), piecewise constant (total variation) or sparse (fused LASSO) with standard regularization techniques which do not take into account the spatial structure (LASSO, ridge and ElasticNet). On a dataset of 103 patients out of ADNI, the techniques using spatial regularizations lead to the best classification rates. They also find coherent areas related to the disease progression.
format Online
Article
Text
id pubmed-4053641
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-40536412014-06-16 Longitudinal deformation models, spatial regularizations and learning strategies to quantify Alzheimer's disease progression Fiot, Jean-Baptiste Raguet, Hugo Risser, Laurent Cohen, Laurent D. Fripp, Jurgen Vialard, François-Xavier Neuroimage Clin Article In the context of Alzheimer's disease, two challenging issues are (1) the characterization of local hippocampal shape changes specific to disease progression and (2) the identification of mild-cognitive impairment patients likely to convert. In the literature, (1) is usually solved first to detect areas potentially related to the disease. These areas are then considered as an input to solve (2). As an alternative to this sequential strategy, we investigate the use of a classification model using logistic regression to address both issues (1) and (2) simultaneously. The classification of the patients therefore does not require any a priori definition of the most representative hippocampal areas potentially related to the disease, as they are automatically detected. We first quantify deformations of patients' hippocampi between two time points using the large deformations by diffeomorphisms framework and transport these deformations to a common template. Since the deformations are expected to be spatially structured, we perform classification combining logistic loss and spatial regularization techniques, which have not been explored so far in this context, as far as we know. The main contribution of this paper is the comparison of regularization techniques enforcing the coefficient maps to be spatially smooth (Sobolev), piecewise constant (total variation) or sparse (fused LASSO) with standard regularization techniques which do not take into account the spatial structure (LASSO, ridge and ElasticNet). On a dataset of 103 patients out of ADNI, the techniques using spatial regularizations lead to the best classification rates. They also find coherent areas related to the disease progression. Elsevier 2014-04-01 /pmc/articles/PMC4053641/ /pubmed/24936423 http://dx.doi.org/10.1016/j.nicl.2014.02.002 Text en © 2014 The Authors http://creativecommons.org/licenses/by/3.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Fiot, Jean-Baptiste
Raguet, Hugo
Risser, Laurent
Cohen, Laurent D.
Fripp, Jurgen
Vialard, François-Xavier
Longitudinal deformation models, spatial regularizations and learning strategies to quantify Alzheimer's disease progression
title Longitudinal deformation models, spatial regularizations and learning strategies to quantify Alzheimer's disease progression
title_full Longitudinal deformation models, spatial regularizations and learning strategies to quantify Alzheimer's disease progression
title_fullStr Longitudinal deformation models, spatial regularizations and learning strategies to quantify Alzheimer's disease progression
title_full_unstemmed Longitudinal deformation models, spatial regularizations and learning strategies to quantify Alzheimer's disease progression
title_short Longitudinal deformation models, spatial regularizations and learning strategies to quantify Alzheimer's disease progression
title_sort longitudinal deformation models, spatial regularizations and learning strategies to quantify alzheimer's disease progression
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4053641/
https://www.ncbi.nlm.nih.gov/pubmed/24936423
http://dx.doi.org/10.1016/j.nicl.2014.02.002
work_keys_str_mv AT fiotjeanbaptiste longitudinaldeformationmodelsspatialregularizationsandlearningstrategiestoquantifyalzheimersdiseaseprogression
AT raguethugo longitudinaldeformationmodelsspatialregularizationsandlearningstrategiestoquantifyalzheimersdiseaseprogression
AT risserlaurent longitudinaldeformationmodelsspatialregularizationsandlearningstrategiestoquantifyalzheimersdiseaseprogression
AT cohenlaurentd longitudinaldeformationmodelsspatialregularizationsandlearningstrategiestoquantifyalzheimersdiseaseprogression
AT frippjurgen longitudinaldeformationmodelsspatialregularizationsandlearningstrategiestoquantifyalzheimersdiseaseprogression
AT vialardfrancoisxavier longitudinaldeformationmodelsspatialregularizationsandlearningstrategiestoquantifyalzheimersdiseaseprogression
AT longitudinaldeformationmodelsspatialregularizationsandlearningstrategiestoquantifyalzheimersdiseaseprogression