Cargando…

Whole-genome analysis of 5-hydroxymethylcytosine and 5-methylcytosine at base resolution in the human brain

BACKGROUND: 5-methylcytosine (mC) can be oxidized by the tet methylcytosine dioxygenase (Tet) family of enzymes to 5-hydroxymethylcytosine (hmC), which is an intermediate of mC demethylation and may also be a stable epigenetic modification that influences chromatin structure. hmC is particularly abu...

Descripción completa

Detalles Bibliográficos
Autores principales:	Wen, Lu, Li, Xianlong, Yan, Liying, Tan, Yuexi, Li, Rong, Zhao, Yangyu, Wang, Yan, Xie, Jingcheng, Zhang, Yan, Song, Chunxiao, Yu, Miao, Liu, Xiaomeng, Zhu, Ping, Li, Xiaoyu, Hou, Yu, Guo, Hongshan, Wu, Xinglong, He, Chuan, Li, Ruiqiang, Tang, Fuchou, Qiao, Jie
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2014
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4053808/ https://www.ncbi.nlm.nih.gov/pubmed/24594098 http://dx.doi.org/10.1186/gb-2014-15-3-r49

Ejemplares similares

5′-methylcytosine and 5′-hydroxymethylcytosine Each Provide Epigenetic Information to the Mouse Zygote
por: Li, Yan, et al.
Publicado: (2013)

Dynamics of 5-methylcytosine and 5-hydroxymethylcytosine during germ cell reprogramming
por: Yamaguchi, Shinpei, et al.
Publicado: (2013)

5-Methylcytosine and 5-Hydroxymethylcytosine Spatiotemporal Profiles in the Mouse Zygote
por: Salvaing, Juliette, et al.
Publicado: (2012)

Deciphering TAL effectors for 5-methylcytosine and 5-hydroxymethylcytosine recognition
por: Zhang, Yuan, et al.
Publicado: (2017)

5-Methylcytosine and 5-Hydroxymethylcytosine Signatures Underlying Pediatric Cancers
por: Jhanwar, Shalu, et al.
Publicado: (2019)

Placental 5-methylcytosine and 5-hydroxymethylcytosine patterns associate with size at birth
por: Piyasena, Chinthika, et al.
Publicado: (2015)

Medium throughput bisulfite sequencing for accurate detection of 5-methylcytosine and 5-hydroxymethylcytosine
por: Chen, Gary G., et al.
Publicado: (2017)

Immunohistochemical Detection of 5-Methylcytosine and 5-Hydroxymethylcytosine in Developing and Postmitotic Mouse Retina
por: Singh, Ratnesh K., et al.
Publicado: (2018)

5-Methylcytosine and 5-Hydroxymethylcytosine in Scrapie-Infected Sheep and Mouse Brain Tissues
por: Hernaiz, Adelaida, et al.
Publicado: (2023)

Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine
por: Jin, Seung-Gi, et al.
Publicado: (2010)

Global and Site-Specific Changes in 5-Methylcytosine and 5-Hydroxymethylcytosine after Extended Post-mortem Interval
por: Gross, Jeffrey A., et al.
Publicado: (2016)

Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution
por: Sun, Zhiyi, et al.
Publicado: (2021)

Detection of 5-methylcytosine and 5-hydroxymethylcytosine in DNA via host–guest interactions inside α-hemolysin nanopores
por: Zeng, Tao, et al.
Publicado: (2015)

A Novel Application of Mixed Effects Models for Reconciling Base-Pair Resolution 5-Methylcytosine and 5-Hydroxymethylcytosine Data in Neuroepigenetics
por: Kochmanski, Joseph, et al.
Publicado: (2019)

Association of 5-Methylcytosine and 5-Hydroxymethylcytosine with Mitochondrial DNA Content and Clinical and Biochemical Parameters in Hepatocellular Carcinoma
por: Shen, Fan, et al.
Publicado: (2013)

Distinct and overlapping control of 5-methylcytosine and 5-hydroxymethylcytosine by the TET proteins in human cancer cells
por: Putiri, Emily L, et al.
Publicado: (2014)

Crystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine
por: Renciuk, Daniel, et al.
Publicado: (2013)

Dynamics of 5-methylcytosine and 5-hydroxymethylcytosine during pronuclear development in equine zygotes produced by ICSI
por: Heras, Sonia, et al.
Publicado: (2017)

A TET Homologue Protein from Coprinopsis cinerea (CcTET) That Biochemically Converts 5-Methylcytosine to 5-Hydroxymethylcytosine, 5-Formylcytosine, and 5-Carboxylcytosine
por: Zhang, Liang, et al.
Publicado: (2014)

A Novel method for the simultaneous identification of methylcytosine and hydroxymethylcytosine at a single base resolution
por: Kawasaki, Yuki, et al.
Publicado: (2017)

TET2 Mutations Are Associated with Specific 5-Methylcytosine and 5-Hydroxymethylcytosine Profiles in Patients with Chronic Myelomonocytic Leukemia
por: Pérez, Cristina, et al.
Publicado: (2012)

Increased 5-hydroxymethylcytosine and decreased 5-methylcytosine are indicators of global epigenetic dysregulation in diffuse intrinsic pontine glioma
por: Ahsan, Sama, et al.
Publicado: (2014)

Evolved DNA Duplex Readers for Strand-Asymmetrically Modified 5-Hydroxymethylcytosine/5-Methylcytosine CpG Dyads
por: Buchmuller, Benjamin C., et al.
Publicado: (2022)

DNA repair enzymes ALKBH2, ALKBH3, and AlkB oxidize 5-methylcytosine to 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxylcytosine in vitro
por: Bian, Ke, et al.
Publicado: (2019)

Accurate Measurement of 5-Methylcytosine and 5-Hydroxymethylcytosine in Human Cerebellum DNA by Oxidative Bisulfite on an Array (OxBS-Array)
por: Field, Sarah F., et al.
Publicado: (2015)

Hyperglycemia affects global 5-methylcytosine and 5-hydroxymethylcytosine in blood genomic DNA through upregulation of SIRT6 and TETs
por: Yuan, Er-Feng, et al.
Publicado: (2019)

5-Formylcytosine landscapes of human preimplantation embryos at single-cell resolution
por: Gao, Yun, et al.
Publicado: (2020)

Variations in 5-methylcytosine and 5-hydroxymethylcytosine among human brain, blood, and saliva using oxBS and the Infinium MethylationEPIC array
por: Gross, Jeffrey A., et al.
Publicado: (2016)

Single-cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed using reduced representation bisulfite sequencing
por: Guo, Hongshan, et al.
Publicado: (2013)

Selective Chemical Labeling and Sequencing of 5-Hydroxymethylcytosine in DNA at Single-Base Resolution
por: Li, Xiaogang, et al.
Publicado: (2021)

Single Molecule Investigation of Ag(+) Interactions with Single Cytosine-, Methylcytosine- and Hydroxymethylcytosine-Cytosine Mismatches in a Nanopore
por: Wang, Yong, et al.
Publicado: (2014)

Dysregulation and prognostic potential of 5-methylcytosine (5mC), 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC) levels in prostate cancer
por: Storebjerg, Tine Maj, et al.
Publicado: (2018)

Corrigendum: Single Molecule Investigation of Ag(+) Interactions with Single Cytosine-, Methylcytosine- and Hydroxymethylcytosine-Cytosine Mismatches in a Nanopore
por: Wang, Yong, et al.
Publicado: (2015)

Distribution of 5-Hydroxymethylcytosine in Different Human Tissues
por: Li, Weiwei, et al.
Publicado: (2011)

Role of ten‐eleven translocation proteins and 5‐hydroxymethylcytosine in hepatocellular carcinoma
por: Wang, Penghui, et al.
Publicado: (2019)

Characterizing 5-hydroxymethylcytosine in human prefrontal cortex at single base resolution
por: Gross, Jeffrey A., et al.
Publicado: (2015)

RRHP: a tag-based approach for 5-hydroxymethylcytosine mapping at single-site resolution
por: Petterson, Adam, et al.
Publicado: (2014)

Brain Region- and Age-Dependent 5-Hydroxymethylcytosine Activity in the Non-Human Primate
por: Xu, Yanru, et al.
Publicado: (2022)

Genomic mapping of 5-hydroxymethylcytosine in the human brain
por: Jin, Seung-Gi, et al.
Publicado: (2011)

The 5-Hydroxymethylcytosine Landscape of Prostate Cancer
por: Sjöström, Martin, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_i775b9fuaush6ik16dcdd1oghi