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Gene expression changes with age in skin, adipose tissue, blood and brain

BACKGROUND: Previous studies have demonstrated that gene expression levels change with age. These changes are hypothesized to influence the aging rate of an individual. We analyzed gene expression changes with age in abdominal skin, subcutaneous adipose tissue and lymphoblastoid cell lines in 856 fe...

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Autores principales: Glass, Daniel, Viñuela, Ana, Davies, Matthew N, Ramasamy, Adaikalavan, Parts, Leopold, Knowles, David, Brown, Andrew A, Hedman, Åsa K, Small, Kerrin S, Buil, Alfonso, Grundberg, Elin, Nica, Alexandra C, Di Meglio, Paola, Nestle, Frank O, Ryten, Mina, Durbin, Richard, McCarthy, Mark I, Deloukas, Panagiotis, Dermitzakis, Emmanouil T, Weale, Michael E, Bataille, Veronique, Spector, Tim D
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4054017/
https://www.ncbi.nlm.nih.gov/pubmed/23889843
http://dx.doi.org/10.1186/gb-2013-14-7-r75
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author Glass, Daniel
Viñuela, Ana
Davies, Matthew N
Ramasamy, Adaikalavan
Parts, Leopold
Knowles, David
Brown, Andrew A
Hedman, Åsa K
Small, Kerrin S
Buil, Alfonso
Grundberg, Elin
Nica, Alexandra C
Di Meglio, Paola
Nestle, Frank O
Ryten, Mina
Durbin, Richard
McCarthy, Mark I
Deloukas, Panagiotis
Dermitzakis, Emmanouil T
Weale, Michael E
Bataille, Veronique
Spector, Tim D
author_facet Glass, Daniel
Viñuela, Ana
Davies, Matthew N
Ramasamy, Adaikalavan
Parts, Leopold
Knowles, David
Brown, Andrew A
Hedman, Åsa K
Small, Kerrin S
Buil, Alfonso
Grundberg, Elin
Nica, Alexandra C
Di Meglio, Paola
Nestle, Frank O
Ryten, Mina
Durbin, Richard
McCarthy, Mark I
Deloukas, Panagiotis
Dermitzakis, Emmanouil T
Weale, Michael E
Bataille, Veronique
Spector, Tim D
author_sort Glass, Daniel
collection PubMed
description BACKGROUND: Previous studies have demonstrated that gene expression levels change with age. These changes are hypothesized to influence the aging rate of an individual. We analyzed gene expression changes with age in abdominal skin, subcutaneous adipose tissue and lymphoblastoid cell lines in 856 female twins in the age range of 39-85 years. Additionally, we investigated genotypic variants involved in genotype-by-age interactions to understand how the genomic regulation of gene expression alters with age. RESULTS: Using a linear mixed model, differential expression with age was identified in 1,672 genes in skin and 188 genes in adipose tissue. Only two genes expressed in lymphoblastoid cell lines showed significant changes with age. Genes significantly regulated by age were compared with expression profiles in 10 brain regions from 100 postmortem brains aged 16 to 83 years. We identified only one age-related gene common to the three tissues. There were 12 genes that showed differential expression with age in both skin and brain tissue and three common to adipose and brain tissues. CONCLUSIONS: Skin showed the most age-related gene expression changes of all the tissues investigated, with many of the genes being previously implicated in fatty acid metabolism, mitochondrial activity, cancer and splicing. A significant proportion of age-related changes in gene expression appear to be tissue-specific with only a few genes sharing an age effect in expression across tissues. More research is needed to improve our understanding of the genetic influences on aging and the relationship with age-related diseases.
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spelling pubmed-40540172014-06-12 Gene expression changes with age in skin, adipose tissue, blood and brain Glass, Daniel Viñuela, Ana Davies, Matthew N Ramasamy, Adaikalavan Parts, Leopold Knowles, David Brown, Andrew A Hedman, Åsa K Small, Kerrin S Buil, Alfonso Grundberg, Elin Nica, Alexandra C Di Meglio, Paola Nestle, Frank O Ryten, Mina Durbin, Richard McCarthy, Mark I Deloukas, Panagiotis Dermitzakis, Emmanouil T Weale, Michael E Bataille, Veronique Spector, Tim D Genome Biol Research BACKGROUND: Previous studies have demonstrated that gene expression levels change with age. These changes are hypothesized to influence the aging rate of an individual. We analyzed gene expression changes with age in abdominal skin, subcutaneous adipose tissue and lymphoblastoid cell lines in 856 female twins in the age range of 39-85 years. Additionally, we investigated genotypic variants involved in genotype-by-age interactions to understand how the genomic regulation of gene expression alters with age. RESULTS: Using a linear mixed model, differential expression with age was identified in 1,672 genes in skin and 188 genes in adipose tissue. Only two genes expressed in lymphoblastoid cell lines showed significant changes with age. Genes significantly regulated by age were compared with expression profiles in 10 brain regions from 100 postmortem brains aged 16 to 83 years. We identified only one age-related gene common to the three tissues. There were 12 genes that showed differential expression with age in both skin and brain tissue and three common to adipose and brain tissues. CONCLUSIONS: Skin showed the most age-related gene expression changes of all the tissues investigated, with many of the genes being previously implicated in fatty acid metabolism, mitochondrial activity, cancer and splicing. A significant proportion of age-related changes in gene expression appear to be tissue-specific with only a few genes sharing an age effect in expression across tissues. More research is needed to improve our understanding of the genetic influences on aging and the relationship with age-related diseases. BioMed Central 2013 2013-07-26 /pmc/articles/PMC4054017/ /pubmed/23889843 http://dx.doi.org/10.1186/gb-2013-14-7-r75 Text en Copyright © 2013 Glass et al.; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Glass, Daniel
Viñuela, Ana
Davies, Matthew N
Ramasamy, Adaikalavan
Parts, Leopold
Knowles, David
Brown, Andrew A
Hedman, Åsa K
Small, Kerrin S
Buil, Alfonso
Grundberg, Elin
Nica, Alexandra C
Di Meglio, Paola
Nestle, Frank O
Ryten, Mina
Durbin, Richard
McCarthy, Mark I
Deloukas, Panagiotis
Dermitzakis, Emmanouil T
Weale, Michael E
Bataille, Veronique
Spector, Tim D
Gene expression changes with age in skin, adipose tissue, blood and brain
title Gene expression changes with age in skin, adipose tissue, blood and brain
title_full Gene expression changes with age in skin, adipose tissue, blood and brain
title_fullStr Gene expression changes with age in skin, adipose tissue, blood and brain
title_full_unstemmed Gene expression changes with age in skin, adipose tissue, blood and brain
title_short Gene expression changes with age in skin, adipose tissue, blood and brain
title_sort gene expression changes with age in skin, adipose tissue, blood and brain
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4054017/
https://www.ncbi.nlm.nih.gov/pubmed/23889843
http://dx.doi.org/10.1186/gb-2013-14-7-r75
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