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A Reweighted ℓ(1)-Minimization Based Compressed Sensing for the Spectral Estimation of Heart Rate Variability Using the Unevenly Sampled Data

In this paper, a reweighted ℓ(1)-minimization based Compressed Sensing (CS) algorithm incorporating the Integral Pulse Frequency Modulation (IPFM) model for spectral estimation of HRV is introduced. Knowing as a novel sensing/sampling paradigm, the theory of CS asserts certain signals that are consi...

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Autores principales: Chen, Szi-Wen, Chao, Shih-Chieh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4055623/
https://www.ncbi.nlm.nih.gov/pubmed/24922059
http://dx.doi.org/10.1371/journal.pone.0099098
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author Chen, Szi-Wen
Chao, Shih-Chieh
author_facet Chen, Szi-Wen
Chao, Shih-Chieh
author_sort Chen, Szi-Wen
collection PubMed
description In this paper, a reweighted ℓ(1)-minimization based Compressed Sensing (CS) algorithm incorporating the Integral Pulse Frequency Modulation (IPFM) model for spectral estimation of HRV is introduced. Knowing as a novel sensing/sampling paradigm, the theory of CS asserts certain signals that are considered sparse or compressible can be possibly reconstructed from substantially fewer measurements than those required by traditional methods. Our study aims to employ a novel reweighted ℓ(1)-minimization CS method for deriving the spectrum of the modulating signal of IPFM model from incomplete RR measurements for HRV assessments. To evaluate the performance of HRV spectral estimation, a quantitative measure, referred to as the Percent Error Power (PEP) that measures the percentage of difference between the true spectrum and the spectrum derived from the incomplete RR dataset, was used. We studied the performance of spectral reconstruction from incomplete simulated and real HRV signals by experimentally truncating a number of RR data accordingly in the top portion, in the bottom portion, and in a random order from the original RR column vector. As a result, for up to 20% data truncation/loss the proposed reweighted ℓ(1)-minimization CS method produced, on average, 2.34%, 2.27%, and 4.55% PEP in the top, bottom, and random data-truncation cases, respectively, on Autoregressive (AR) model derived simulated HRV signals. Similarly, for up to 20% data loss the proposed method produced 5.15%, 4.33%, and 0.39% PEP in the top, bottom, and random data-truncation cases, respectively, on a real HRV database drawn from PhysioNet. Moreover, results generated by a number of intensive numerical experiments all indicated that the reweighted ℓ(1)-minimization CS method always achieved the most accurate and high-fidelity HRV spectral estimates in every aspect, compared with the ℓ(1)-minimization based method and Lomb's method used for estimating the spectrum of HRV from unevenly sampled RR data.
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spelling pubmed-40556232014-06-18 A Reweighted ℓ(1)-Minimization Based Compressed Sensing for the Spectral Estimation of Heart Rate Variability Using the Unevenly Sampled Data Chen, Szi-Wen Chao, Shih-Chieh PLoS One Research Article In this paper, a reweighted ℓ(1)-minimization based Compressed Sensing (CS) algorithm incorporating the Integral Pulse Frequency Modulation (IPFM) model for spectral estimation of HRV is introduced. Knowing as a novel sensing/sampling paradigm, the theory of CS asserts certain signals that are considered sparse or compressible can be possibly reconstructed from substantially fewer measurements than those required by traditional methods. Our study aims to employ a novel reweighted ℓ(1)-minimization CS method for deriving the spectrum of the modulating signal of IPFM model from incomplete RR measurements for HRV assessments. To evaluate the performance of HRV spectral estimation, a quantitative measure, referred to as the Percent Error Power (PEP) that measures the percentage of difference between the true spectrum and the spectrum derived from the incomplete RR dataset, was used. We studied the performance of spectral reconstruction from incomplete simulated and real HRV signals by experimentally truncating a number of RR data accordingly in the top portion, in the bottom portion, and in a random order from the original RR column vector. As a result, for up to 20% data truncation/loss the proposed reweighted ℓ(1)-minimization CS method produced, on average, 2.34%, 2.27%, and 4.55% PEP in the top, bottom, and random data-truncation cases, respectively, on Autoregressive (AR) model derived simulated HRV signals. Similarly, for up to 20% data loss the proposed method produced 5.15%, 4.33%, and 0.39% PEP in the top, bottom, and random data-truncation cases, respectively, on a real HRV database drawn from PhysioNet. Moreover, results generated by a number of intensive numerical experiments all indicated that the reweighted ℓ(1)-minimization CS method always achieved the most accurate and high-fidelity HRV spectral estimates in every aspect, compared with the ℓ(1)-minimization based method and Lomb's method used for estimating the spectrum of HRV from unevenly sampled RR data. Public Library of Science 2014-06-12 /pmc/articles/PMC4055623/ /pubmed/24922059 http://dx.doi.org/10.1371/journal.pone.0099098 Text en © 2014 Chen, Chao http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Chen, Szi-Wen
Chao, Shih-Chieh
A Reweighted ℓ(1)-Minimization Based Compressed Sensing for the Spectral Estimation of Heart Rate Variability Using the Unevenly Sampled Data
title A Reweighted ℓ(1)-Minimization Based Compressed Sensing for the Spectral Estimation of Heart Rate Variability Using the Unevenly Sampled Data
title_full A Reweighted ℓ(1)-Minimization Based Compressed Sensing for the Spectral Estimation of Heart Rate Variability Using the Unevenly Sampled Data
title_fullStr A Reweighted ℓ(1)-Minimization Based Compressed Sensing for the Spectral Estimation of Heart Rate Variability Using the Unevenly Sampled Data
title_full_unstemmed A Reweighted ℓ(1)-Minimization Based Compressed Sensing for the Spectral Estimation of Heart Rate Variability Using the Unevenly Sampled Data
title_short A Reweighted ℓ(1)-Minimization Based Compressed Sensing for the Spectral Estimation of Heart Rate Variability Using the Unevenly Sampled Data
title_sort reweighted ℓ(1)-minimization based compressed sensing for the spectral estimation of heart rate variability using the unevenly sampled data
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4055623/
https://www.ncbi.nlm.nih.gov/pubmed/24922059
http://dx.doi.org/10.1371/journal.pone.0099098
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