Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis

SCB34 is a sequence type 131, highly invasive, multidrug-resistant Escherichia coli isolate that produced neonatal bacteremia. Whole-genome sequencing was performed using a 250-bp library on the Illumina MiSeq platform; 5,910,264 reads were assembled de novo using the A5 assembly pipeline. The total...

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Detalles Bibliográficos
Autores principales: Chavez-Bueno, Susana, Day, Michael W., Toby, Inimary T., Akins, Darrin R., Dyer, David W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2014
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056292/
https://www.ncbi.nlm.nih.gov/pubmed/24926049
http://dx.doi.org/10.1128/genomeA.00514-14
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author Chavez-Bueno, Susana
Day, Michael W.
Toby, Inimary T.
Akins, Darrin R.
Dyer, David W.
author_facet Chavez-Bueno, Susana
Day, Michael W.
Toby, Inimary T.
Akins, Darrin R.
Dyer, David W.
author_sort Chavez-Bueno, Susana
collection PubMed
description SCB34 is a sequence type 131, highly invasive, multidrug-resistant Escherichia coli isolate that produced neonatal bacteremia. Whole-genome sequencing was performed using a 250-bp library on the Illumina MiSeq platform; 5,910,264 reads were assembled de novo using the A5 assembly pipeline. The total contig length was 5,227,742 bp; the RAST server was used for annotation.
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spelling pubmed-40562922014-06-13 Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis Chavez-Bueno, Susana Day, Michael W. Toby, Inimary T. Akins, Darrin R. Dyer, David W. Genome Announc Prokaryotes SCB34 is a sequence type 131, highly invasive, multidrug-resistant Escherichia coli isolate that produced neonatal bacteremia. Whole-genome sequencing was performed using a 250-bp library on the Illumina MiSeq platform; 5,910,264 reads were assembled de novo using the A5 assembly pipeline. The total contig length was 5,227,742 bp; the RAST server was used for annotation. American Society for Microbiology 2014-06-12 /pmc/articles/PMC4056292/ /pubmed/24926049 http://dx.doi.org/10.1128/genomeA.00514-14 Text en Copyright © 2014 Chavez-Bueno et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 3.0 Unported license (http://creativecommons.org/licenses/by/3.0/) .
spellingShingle Prokaryotes
Chavez-Bueno, Susana
Day, Michael W.
Toby, Inimary T.
Akins, Darrin R.
Dyer, David W.
Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis
title Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis
title_full Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis
title_fullStr Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis
title_full_unstemmed Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis
title_short Genome Sequence of SCB34, a Sequence Type 131 Multidrug-Resistant Escherichia coli Isolate Causing Neonatal Early-Onset Sepsis
title_sort genome sequence of scb34, a sequence type 131 multidrug-resistant escherichia coli isolate causing neonatal early-onset sepsis
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056292/
https://www.ncbi.nlm.nih.gov/pubmed/24926049
http://dx.doi.org/10.1128/genomeA.00514-14
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