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Picosecond-Resolved Fluorescent Probes at Functionally Distinct Tryptophans within a Thermophilic Alcohol Dehydrogenase: Relationship of Temperature-Dependent Changes in Fluorescence to Catalysis
[Image: see text] Two single-tryptophan variants were generated in a thermophilic alcohol dehydrogenase with the goal of correlating temperature-dependent changes in local fluorescence with the previously demonstrated catalytic break at ca. 30 °C (Kohen et al., Nature1999, 399, 496). One tryptophan...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056859/ https://www.ncbi.nlm.nih.gov/pubmed/24892947 http://dx.doi.org/10.1021/jp500825x |
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author | Meadows, Corey W. Ou, Ryan Klinman, Judith P. |
author_facet | Meadows, Corey W. Ou, Ryan Klinman, Judith P. |
author_sort | Meadows, Corey W. |
collection | PubMed |
description | [Image: see text] Two single-tryptophan variants were generated in a thermophilic alcohol dehydrogenase with the goal of correlating temperature-dependent changes in local fluorescence with the previously demonstrated catalytic break at ca. 30 °C (Kohen et al., Nature1999, 399, 496). One tryptophan variant, W87in, resides at the active site within van der Waals contact of bound alcohol substrate; the other variant, W167in, is a remote-site surface reporter located >25 Å from the active site. Picosecond-resolved fluorescence measurements were used to analyze fluorescence lifetimes, time-dependent Stokes shifts, and the extent of collisional quenching at Trp87 and Trp167 as a function of temperature. A subnanosecond fluorescence decay rate constant has been detected for W87in that is ascribed to the proximity of the active site Zn(2+) and shows a break in behavior at 30 °C. For the remainder of the reported lifetime measurements, there is no detectable break between 10 and 50 °C, in contrast with previously reported hydrogen/deuterium exchange experiments that revealed a temperature-dependent break analogous to catalysis (Liang et al., Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 9556). We conclude that the motions that lead to the rigidification of ht-ADH below 30 °C are likely to be dominated by global processes slower than the picosecond to nanosecond motions measured herein. In the case of collisional quenching of fluorescence by acrylamide, W87in and W167in behave in a similar manner that resembles free tryptophan in water. Stokes shift measurements, by contrast, show distinctive behaviors in which the active-site tryptophan relaxation is highly temperature-dependent, whereas the solvent-exposed tryptophan’s dynamics are temperature-independent. These data are concluded to reflect a significantly constrained environment surrounding the active site Trp87 that both increases the magnitude of the Stokes shift and its temperature-dependence. The results are discussed in the context of spatially distinct differences in enthalpic barriers for protein conformational sampling that may be related to catalysis. |
format | Online Article Text |
id | pubmed-4056859 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-40568592015-06-03 Picosecond-Resolved Fluorescent Probes at Functionally Distinct Tryptophans within a Thermophilic Alcohol Dehydrogenase: Relationship of Temperature-Dependent Changes in Fluorescence to Catalysis Meadows, Corey W. Ou, Ryan Klinman, Judith P. J Phys Chem B [Image: see text] Two single-tryptophan variants were generated in a thermophilic alcohol dehydrogenase with the goal of correlating temperature-dependent changes in local fluorescence with the previously demonstrated catalytic break at ca. 30 °C (Kohen et al., Nature1999, 399, 496). One tryptophan variant, W87in, resides at the active site within van der Waals contact of bound alcohol substrate; the other variant, W167in, is a remote-site surface reporter located >25 Å from the active site. Picosecond-resolved fluorescence measurements were used to analyze fluorescence lifetimes, time-dependent Stokes shifts, and the extent of collisional quenching at Trp87 and Trp167 as a function of temperature. A subnanosecond fluorescence decay rate constant has been detected for W87in that is ascribed to the proximity of the active site Zn(2+) and shows a break in behavior at 30 °C. For the remainder of the reported lifetime measurements, there is no detectable break between 10 and 50 °C, in contrast with previously reported hydrogen/deuterium exchange experiments that revealed a temperature-dependent break analogous to catalysis (Liang et al., Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 9556). We conclude that the motions that lead to the rigidification of ht-ADH below 30 °C are likely to be dominated by global processes slower than the picosecond to nanosecond motions measured herein. In the case of collisional quenching of fluorescence by acrylamide, W87in and W167in behave in a similar manner that resembles free tryptophan in water. Stokes shift measurements, by contrast, show distinctive behaviors in which the active-site tryptophan relaxation is highly temperature-dependent, whereas the solvent-exposed tryptophan’s dynamics are temperature-independent. These data are concluded to reflect a significantly constrained environment surrounding the active site Trp87 that both increases the magnitude of the Stokes shift and its temperature-dependence. The results are discussed in the context of spatially distinct differences in enthalpic barriers for protein conformational sampling that may be related to catalysis. American Chemical Society 2014-06-03 2014-06-12 /pmc/articles/PMC4056859/ /pubmed/24892947 http://dx.doi.org/10.1021/jp500825x Text en Copyright © 2014 American Chemical Society |
spellingShingle | Meadows, Corey W. Ou, Ryan Klinman, Judith P. Picosecond-Resolved Fluorescent Probes at Functionally Distinct Tryptophans within a Thermophilic Alcohol Dehydrogenase: Relationship of Temperature-Dependent Changes in Fluorescence to Catalysis |
title | Picosecond-Resolved
Fluorescent Probes at Functionally
Distinct Tryptophans within a Thermophilic Alcohol Dehydrogenase:
Relationship of Temperature-Dependent Changes in Fluorescence to Catalysis |
title_full | Picosecond-Resolved
Fluorescent Probes at Functionally
Distinct Tryptophans within a Thermophilic Alcohol Dehydrogenase:
Relationship of Temperature-Dependent Changes in Fluorescence to Catalysis |
title_fullStr | Picosecond-Resolved
Fluorescent Probes at Functionally
Distinct Tryptophans within a Thermophilic Alcohol Dehydrogenase:
Relationship of Temperature-Dependent Changes in Fluorescence to Catalysis |
title_full_unstemmed | Picosecond-Resolved
Fluorescent Probes at Functionally
Distinct Tryptophans within a Thermophilic Alcohol Dehydrogenase:
Relationship of Temperature-Dependent Changes in Fluorescence to Catalysis |
title_short | Picosecond-Resolved
Fluorescent Probes at Functionally
Distinct Tryptophans within a Thermophilic Alcohol Dehydrogenase:
Relationship of Temperature-Dependent Changes in Fluorescence to Catalysis |
title_sort | picosecond-resolved
fluorescent probes at functionally
distinct tryptophans within a thermophilic alcohol dehydrogenase:
relationship of temperature-dependent changes in fluorescence to catalysis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056859/ https://www.ncbi.nlm.nih.gov/pubmed/24892947 http://dx.doi.org/10.1021/jp500825x |
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