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mtsslSuite: In silico spin labelling, trilateration and distance-constrained rigid body docking in PyMOL
Nanometer distance measurements based on electron paramagnetic resonance methods in combination with site-directed spin labelling are powerful tools for the structural analysis of macromolecules. The software package mtsslSuite provides scientists with a set of tools for the translation of experimen...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056886/ https://www.ncbi.nlm.nih.gov/pubmed/24954955 http://dx.doi.org/10.1080/00268976.2013.809804 |
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author | Hagelueken, Gregor Abdullin, Dinar Ward, Richard Schiemann, Olav |
author_facet | Hagelueken, Gregor Abdullin, Dinar Ward, Richard Schiemann, Olav |
author_sort | Hagelueken, Gregor |
collection | PubMed |
description | Nanometer distance measurements based on electron paramagnetic resonance methods in combination with site-directed spin labelling are powerful tools for the structural analysis of macromolecules. The software package mtsslSuite provides scientists with a set of tools for the translation of experimental distance distributions into structural information. The package is based on the previously published mtsslWizard software for in silico spin labelling. The mtsslSuite includes a new version of MtsslWizard that has improved performance and now includes additional types of spin labels. Moreover, it contains applications for the trilateration of paramagnetic centres in biomolecules and for rigid-body docking of subdomains of macromolecular complexes. The mtsslSuite is tested on a number of challenging test cases and its strengths and weaknesses are evaluated. |
format | Online Article Text |
id | pubmed-4056886 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-40568862014-06-20 mtsslSuite: In silico spin labelling, trilateration and distance-constrained rigid body docking in PyMOL Hagelueken, Gregor Abdullin, Dinar Ward, Richard Schiemann, Olav Mol Phys Invited Article Nanometer distance measurements based on electron paramagnetic resonance methods in combination with site-directed spin labelling are powerful tools for the structural analysis of macromolecules. The software package mtsslSuite provides scientists with a set of tools for the translation of experimental distance distributions into structural information. The package is based on the previously published mtsslWizard software for in silico spin labelling. The mtsslSuite includes a new version of MtsslWizard that has improved performance and now includes additional types of spin labels. Moreover, it contains applications for the trilateration of paramagnetic centres in biomolecules and for rigid-body docking of subdomains of macromolecular complexes. The mtsslSuite is tested on a number of challenging test cases and its strengths and weaknesses are evaluated. Taylor & Francis 2013-07-01 2013-10 /pmc/articles/PMC4056886/ /pubmed/24954955 http://dx.doi.org/10.1080/00268976.2013.809804 Text en © 2013 The Author(s). Published by Taylor & Francis. http://www.informaworld.com/mpp/uploads/iopenaccess_tcs.pdf This is an open access article distributed under the Supplemental Terms and Conditions for iOpenAccess articles published in Taylor & Francis journals (http://www.informaworld.com/mpp/uploads/iopenaccess_tcs.pdf) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Invited Article Hagelueken, Gregor Abdullin, Dinar Ward, Richard Schiemann, Olav mtsslSuite: In silico spin labelling, trilateration and distance-constrained rigid body docking in PyMOL |
title | mtsslSuite: In silico spin labelling, trilateration and distance-constrained rigid body docking in PyMOL |
title_full | mtsslSuite: In silico spin labelling, trilateration and distance-constrained rigid body docking in PyMOL |
title_fullStr | mtsslSuite: In silico spin labelling, trilateration and distance-constrained rigid body docking in PyMOL |
title_full_unstemmed | mtsslSuite: In silico spin labelling, trilateration and distance-constrained rigid body docking in PyMOL |
title_short | mtsslSuite: In silico spin labelling, trilateration and distance-constrained rigid body docking in PyMOL |
title_sort | mtsslsuite: in silico spin labelling, trilateration and distance-constrained rigid body docking in pymol |
topic | Invited Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056886/ https://www.ncbi.nlm.nih.gov/pubmed/24954955 http://dx.doi.org/10.1080/00268976.2013.809804 |
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