Cargando…

Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor

This paper describes methodology for direct and indirect detections of a specific oligonucleotide for Epstein-Barr virus (EBV) using electrochemical techniques. The sequence of oligonucleotide probe (EBV1) revealed a high sequence identity (100%) with the EBV genome. For the development of the genos...

Descripción completa

Detalles Bibliográficos
Autores principales: Balvedi, Renata P. A., Castro, Ana C. H., Madurro, João M., Brito-Madurro, Ana G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Molecular Diversity Preservation International (MDPI) 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4057774/
https://www.ncbi.nlm.nih.gov/pubmed/24853286
http://dx.doi.org/10.3390/ijms15059051
_version_ 1782321030130302976
author Balvedi, Renata P. A.
Castro, Ana C. H.
Madurro, João M.
Brito-Madurro, Ana G.
author_facet Balvedi, Renata P. A.
Castro, Ana C. H.
Madurro, João M.
Brito-Madurro, Ana G.
author_sort Balvedi, Renata P. A.
collection PubMed
description This paper describes methodology for direct and indirect detections of a specific oligonucleotide for Epstein-Barr virus (EBV) using electrochemical techniques. The sequence of oligonucleotide probe (EBV1) revealed a high sequence identity (100%) with the EBV genome. For the development of the genosensor, EBV1 was grafted to the platform sensitized with poly(4-aminothiophenol). After that, the hybridization reaction was carried out with the complementary target (EBV2) on the modified electrode surface using ethidium bromide as DNA intercalator. The oxidation peak currents of ethidium bromide increased linearly with the values of the concentration of the complementary sequences in the range from 3.78 to 756 μmol·L(−1). In nonstringent experimental conditions, this genosensor can detect 17.32 nmol·L(−1) (three independent experiments) of oligonucleotide target, discriminating between complementary and non-complementary oligonucleotides, as well as differentiating one-base mismatch, as required for detection of genetic diseases caused by point mutations. The biosensor also displayed high specificity to the EBV target with elimination of interference from mix (alanine, glucose, uric acid, ascorbic acid, bovine serum albumin (BSA), glutamate and glycine) and good stability (120 days). In addition, it was possible to observe differences between hybridized and non-hybridized surfaces through atomic force microscopy.
format Online
Article
Text
id pubmed-4057774
institution National Center for Biotechnology Information
language English
publishDate 2014
publisher Molecular Diversity Preservation International (MDPI)
record_format MEDLINE/PubMed
spelling pubmed-40577742014-06-16 Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor Balvedi, Renata P. A. Castro, Ana C. H. Madurro, João M. Brito-Madurro, Ana G. Int J Mol Sci Article This paper describes methodology for direct and indirect detections of a specific oligonucleotide for Epstein-Barr virus (EBV) using electrochemical techniques. The sequence of oligonucleotide probe (EBV1) revealed a high sequence identity (100%) with the EBV genome. For the development of the genosensor, EBV1 was grafted to the platform sensitized with poly(4-aminothiophenol). After that, the hybridization reaction was carried out with the complementary target (EBV2) on the modified electrode surface using ethidium bromide as DNA intercalator. The oxidation peak currents of ethidium bromide increased linearly with the values of the concentration of the complementary sequences in the range from 3.78 to 756 μmol·L(−1). In nonstringent experimental conditions, this genosensor can detect 17.32 nmol·L(−1) (three independent experiments) of oligonucleotide target, discriminating between complementary and non-complementary oligonucleotides, as well as differentiating one-base mismatch, as required for detection of genetic diseases caused by point mutations. The biosensor also displayed high specificity to the EBV target with elimination of interference from mix (alanine, glucose, uric acid, ascorbic acid, bovine serum albumin (BSA), glutamate and glycine) and good stability (120 days). In addition, it was possible to observe differences between hybridized and non-hybridized surfaces through atomic force microscopy. Molecular Diversity Preservation International (MDPI) 2014-05-21 /pmc/articles/PMC4057774/ /pubmed/24853286 http://dx.doi.org/10.3390/ijms15059051 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Balvedi, Renata P. A.
Castro, Ana C. H.
Madurro, João M.
Brito-Madurro, Ana G.
Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor
title Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor
title_full Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor
title_fullStr Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor
title_full_unstemmed Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor
title_short Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor
title_sort detection of a specific biomarker for epstein-barr virus using a polymer-based genosensor
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4057774/
https://www.ncbi.nlm.nih.gov/pubmed/24853286
http://dx.doi.org/10.3390/ijms15059051
work_keys_str_mv AT balvedirenatapa detectionofaspecificbiomarkerforepsteinbarrvirususingapolymerbasedgenosensor
AT castroanach detectionofaspecificbiomarkerforepsteinbarrvirususingapolymerbasedgenosensor
AT madurrojoaom detectionofaspecificbiomarkerforepsteinbarrvirususingapolymerbasedgenosensor
AT britomadurroanag detectionofaspecificbiomarkerforepsteinbarrvirususingapolymerbasedgenosensor