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Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor
This paper describes methodology for direct and indirect detections of a specific oligonucleotide for Epstein-Barr virus (EBV) using electrochemical techniques. The sequence of oligonucleotide probe (EBV1) revealed a high sequence identity (100%) with the EBV genome. For the development of the genos...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Molecular Diversity Preservation International (MDPI)
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4057774/ https://www.ncbi.nlm.nih.gov/pubmed/24853286 http://dx.doi.org/10.3390/ijms15059051 |
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author | Balvedi, Renata P. A. Castro, Ana C. H. Madurro, João M. Brito-Madurro, Ana G. |
author_facet | Balvedi, Renata P. A. Castro, Ana C. H. Madurro, João M. Brito-Madurro, Ana G. |
author_sort | Balvedi, Renata P. A. |
collection | PubMed |
description | This paper describes methodology for direct and indirect detections of a specific oligonucleotide for Epstein-Barr virus (EBV) using electrochemical techniques. The sequence of oligonucleotide probe (EBV1) revealed a high sequence identity (100%) with the EBV genome. For the development of the genosensor, EBV1 was grafted to the platform sensitized with poly(4-aminothiophenol). After that, the hybridization reaction was carried out with the complementary target (EBV2) on the modified electrode surface using ethidium bromide as DNA intercalator. The oxidation peak currents of ethidium bromide increased linearly with the values of the concentration of the complementary sequences in the range from 3.78 to 756 μmol·L(−1). In nonstringent experimental conditions, this genosensor can detect 17.32 nmol·L(−1) (three independent experiments) of oligonucleotide target, discriminating between complementary and non-complementary oligonucleotides, as well as differentiating one-base mismatch, as required for detection of genetic diseases caused by point mutations. The biosensor also displayed high specificity to the EBV target with elimination of interference from mix (alanine, glucose, uric acid, ascorbic acid, bovine serum albumin (BSA), glutamate and glycine) and good stability (120 days). In addition, it was possible to observe differences between hybridized and non-hybridized surfaces through atomic force microscopy. |
format | Online Article Text |
id | pubmed-4057774 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Molecular Diversity Preservation International (MDPI) |
record_format | MEDLINE/PubMed |
spelling | pubmed-40577742014-06-16 Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor Balvedi, Renata P. A. Castro, Ana C. H. Madurro, João M. Brito-Madurro, Ana G. Int J Mol Sci Article This paper describes methodology for direct and indirect detections of a specific oligonucleotide for Epstein-Barr virus (EBV) using electrochemical techniques. The sequence of oligonucleotide probe (EBV1) revealed a high sequence identity (100%) with the EBV genome. For the development of the genosensor, EBV1 was grafted to the platform sensitized with poly(4-aminothiophenol). After that, the hybridization reaction was carried out with the complementary target (EBV2) on the modified electrode surface using ethidium bromide as DNA intercalator. The oxidation peak currents of ethidium bromide increased linearly with the values of the concentration of the complementary sequences in the range from 3.78 to 756 μmol·L(−1). In nonstringent experimental conditions, this genosensor can detect 17.32 nmol·L(−1) (three independent experiments) of oligonucleotide target, discriminating between complementary and non-complementary oligonucleotides, as well as differentiating one-base mismatch, as required for detection of genetic diseases caused by point mutations. The biosensor also displayed high specificity to the EBV target with elimination of interference from mix (alanine, glucose, uric acid, ascorbic acid, bovine serum albumin (BSA), glutamate and glycine) and good stability (120 days). In addition, it was possible to observe differences between hybridized and non-hybridized surfaces through atomic force microscopy. Molecular Diversity Preservation International (MDPI) 2014-05-21 /pmc/articles/PMC4057774/ /pubmed/24853286 http://dx.doi.org/10.3390/ijms15059051 Text en © 2014 by the authors; licensee MDPI, Basel, Switzerland http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Article Balvedi, Renata P. A. Castro, Ana C. H. Madurro, João M. Brito-Madurro, Ana G. Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor |
title | Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor |
title_full | Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor |
title_fullStr | Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor |
title_full_unstemmed | Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor |
title_short | Detection of a Specific Biomarker for Epstein-Barr Virus Using a Polymer-Based Genosensor |
title_sort | detection of a specific biomarker for epstein-barr virus using a polymer-based genosensor |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4057774/ https://www.ncbi.nlm.nih.gov/pubmed/24853286 http://dx.doi.org/10.3390/ijms15059051 |
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