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Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics
BACKGROUND: Animal venoms attract enormous interest given their potential for pharmacological discovery and understanding the evolution of natural chemistries. Next-generation transcriptomics and proteomics provide unparalleled, but underexploited, capabilities for venom characterization. We combine...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4058007/ https://www.ncbi.nlm.nih.gov/pubmed/24916504 http://dx.doi.org/10.1186/1471-2164-15-366 |
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author | Haney, Robert A Ayoub, Nadia A Clarke, Thomas H Hayashi, Cheryl Y Garb, Jessica E |
author_facet | Haney, Robert A Ayoub, Nadia A Clarke, Thomas H Hayashi, Cheryl Y Garb, Jessica E |
author_sort | Haney, Robert A |
collection | PubMed |
description | BACKGROUND: Animal venoms attract enormous interest given their potential for pharmacological discovery and understanding the evolution of natural chemistries. Next-generation transcriptomics and proteomics provide unparalleled, but underexploited, capabilities for venom characterization. We combined multi-tissue RNA-Seq with mass spectrometry and bioinformatic analyses to determine venom gland specific transcripts and venom proteins from the Western black widow spider (Latrodectus hesperus) and investigated their evolution. RESULTS: We estimated expression of 97,217 L. hesperus transcripts in venom glands relative to silk and cephalothorax tissues. We identified 695 venom gland specific transcripts (VSTs), many of which BLAST and GO term analyses indicate may function as toxins or their delivery agents. ~38% of VSTs had BLAST hits, including latrotoxins, inhibitor cystine knot toxins, CRISPs, hyaluronidases, chitinase, and proteases, and 59% of VSTs had predicted protein domains. Latrotoxins are venom toxins that cause massive neurotransmitter release from vertebrate or invertebrate neurons. We discovered ≥ 20 divergent latrotoxin paralogs expressed in L. hesperus venom glands, significantly increasing this biomedically important family. Mass spectrometry of L. hesperus venom identified 49 proteins from VSTs, 24 of which BLAST to toxins. Phylogenetic analyses showed venom gland specific gene family expansions and shifts in tissue expression. CONCLUSIONS: Quantitative expression analyses comparing multiple tissues are necessary to identify venom gland specific transcripts. We present a black widow venom specific exome that uncovers a trove of diverse toxins and associated proteins, suggesting a dynamic evolutionary history. This justifies a reevaluation of the functional activities of black widow venom in light of its emerging complexity. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2164-15-366) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4058007 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-40580072014-06-17 Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics Haney, Robert A Ayoub, Nadia A Clarke, Thomas H Hayashi, Cheryl Y Garb, Jessica E BMC Genomics Research Article BACKGROUND: Animal venoms attract enormous interest given their potential for pharmacological discovery and understanding the evolution of natural chemistries. Next-generation transcriptomics and proteomics provide unparalleled, but underexploited, capabilities for venom characterization. We combined multi-tissue RNA-Seq with mass spectrometry and bioinformatic analyses to determine venom gland specific transcripts and venom proteins from the Western black widow spider (Latrodectus hesperus) and investigated their evolution. RESULTS: We estimated expression of 97,217 L. hesperus transcripts in venom glands relative to silk and cephalothorax tissues. We identified 695 venom gland specific transcripts (VSTs), many of which BLAST and GO term analyses indicate may function as toxins or their delivery agents. ~38% of VSTs had BLAST hits, including latrotoxins, inhibitor cystine knot toxins, CRISPs, hyaluronidases, chitinase, and proteases, and 59% of VSTs had predicted protein domains. Latrotoxins are venom toxins that cause massive neurotransmitter release from vertebrate or invertebrate neurons. We discovered ≥ 20 divergent latrotoxin paralogs expressed in L. hesperus venom glands, significantly increasing this biomedically important family. Mass spectrometry of L. hesperus venom identified 49 proteins from VSTs, 24 of which BLAST to toxins. Phylogenetic analyses showed venom gland specific gene family expansions and shifts in tissue expression. CONCLUSIONS: Quantitative expression analyses comparing multiple tissues are necessary to identify venom gland specific transcripts. We present a black widow venom specific exome that uncovers a trove of diverse toxins and associated proteins, suggesting a dynamic evolutionary history. This justifies a reevaluation of the functional activities of black widow venom in light of its emerging complexity. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/1471-2164-15-366) contains supplementary material, which is available to authorized users. BioMed Central 2014-06-11 /pmc/articles/PMC4058007/ /pubmed/24916504 http://dx.doi.org/10.1186/1471-2164-15-366 Text en © Haney et al.; licensee BioMed Central Ltd. 2014 This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Haney, Robert A Ayoub, Nadia A Clarke, Thomas H Hayashi, Cheryl Y Garb, Jessica E Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics |
title | Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics |
title_full | Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics |
title_fullStr | Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics |
title_full_unstemmed | Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics |
title_short | Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics |
title_sort | dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4058007/ https://www.ncbi.nlm.nih.gov/pubmed/24916504 http://dx.doi.org/10.1186/1471-2164-15-366 |
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