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Investigations of the Low Frequency Modes of Ferric Cytochrome c Using Vibrational Coherence Spectroscopy
[Image: see text] Femtosecond vibrational coherence spectroscopy is used to investigate the low frequency vibrational dynamics of the electron transfer heme protein, cytochrome c (cyt c). The vibrational coherence spectra of ferric cyt c have been measured as a function of excitation wavelength with...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4059251/ https://www.ncbi.nlm.nih.gov/pubmed/24823442 http://dx.doi.org/10.1021/jp501298c |
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author | Karunakaran, Venugopal Sun, Yuhan Benabbas, Abdelkrim Champion, Paul M. |
author_facet | Karunakaran, Venugopal Sun, Yuhan Benabbas, Abdelkrim Champion, Paul M. |
author_sort | Karunakaran, Venugopal |
collection | PubMed |
description | [Image: see text] Femtosecond vibrational coherence spectroscopy is used to investigate the low frequency vibrational dynamics of the electron transfer heme protein, cytochrome c (cyt c). The vibrational coherence spectra of ferric cyt c have been measured as a function of excitation wavelength within the Soret band. Vibrational coherence spectra obtained with excitation between 412 and 421 nm display a strong mode at ∼44 cm(–1) that has been assigned to have a significant contribution from heme ruffling motion in the electronic ground state. This assignment is based partially on the presence of a large heme ruffling distortion in the normal coordinate structural decomposition (NSD) analysis of the X-ray crystal structures. When the excitation wavelength is moved into the ∼421–435 nm region, the transient absorption increases along with the relative intensity of two modes near ∼55 and 30 cm(–1). The intensity of the mode near 44 cm(–1) appears to minimize in this region and then recover (but with an opposite phase compared to the blue excitation) when the laser is tuned to 443 nm. These observations are consistent with the superposition of both ground and excited state coherence in the 421–435 nm region due to the excitation of a weak porphyrin-to-iron charge transfer (CT) state, which has a lifetime long enough to observe vibrational coherence. The mode near 55 cm(–1) is suggested to arise from ruffling in a transient CT state that has a less ruffled heme due to its iron d(6) configuration. |
format | Online Article Text |
id | pubmed-4059251 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-40592512015-05-13 Investigations of the Low Frequency Modes of Ferric Cytochrome c Using Vibrational Coherence Spectroscopy Karunakaran, Venugopal Sun, Yuhan Benabbas, Abdelkrim Champion, Paul M. J Phys Chem B [Image: see text] Femtosecond vibrational coherence spectroscopy is used to investigate the low frequency vibrational dynamics of the electron transfer heme protein, cytochrome c (cyt c). The vibrational coherence spectra of ferric cyt c have been measured as a function of excitation wavelength within the Soret band. Vibrational coherence spectra obtained with excitation between 412 and 421 nm display a strong mode at ∼44 cm(–1) that has been assigned to have a significant contribution from heme ruffling motion in the electronic ground state. This assignment is based partially on the presence of a large heme ruffling distortion in the normal coordinate structural decomposition (NSD) analysis of the X-ray crystal structures. When the excitation wavelength is moved into the ∼421–435 nm region, the transient absorption increases along with the relative intensity of two modes near ∼55 and 30 cm(–1). The intensity of the mode near 44 cm(–1) appears to minimize in this region and then recover (but with an opposite phase compared to the blue excitation) when the laser is tuned to 443 nm. These observations are consistent with the superposition of both ground and excited state coherence in the 421–435 nm region due to the excitation of a weak porphyrin-to-iron charge transfer (CT) state, which has a lifetime long enough to observe vibrational coherence. The mode near 55 cm(–1) is suggested to arise from ruffling in a transient CT state that has a less ruffled heme due to its iron d(6) configuration. American Chemical Society 2014-05-13 2014-06-12 /pmc/articles/PMC4059251/ /pubmed/24823442 http://dx.doi.org/10.1021/jp501298c Text en Copyright © 2014 American Chemical Society |
spellingShingle | Karunakaran, Venugopal Sun, Yuhan Benabbas, Abdelkrim Champion, Paul M. Investigations of the Low Frequency Modes of Ferric Cytochrome c Using Vibrational Coherence Spectroscopy |
title | Investigations
of the Low Frequency Modes of Ferric
Cytochrome c Using Vibrational Coherence Spectroscopy |
title_full | Investigations
of the Low Frequency Modes of Ferric
Cytochrome c Using Vibrational Coherence Spectroscopy |
title_fullStr | Investigations
of the Low Frequency Modes of Ferric
Cytochrome c Using Vibrational Coherence Spectroscopy |
title_full_unstemmed | Investigations
of the Low Frequency Modes of Ferric
Cytochrome c Using Vibrational Coherence Spectroscopy |
title_short | Investigations
of the Low Frequency Modes of Ferric
Cytochrome c Using Vibrational Coherence Spectroscopy |
title_sort | investigations
of the low frequency modes of ferric
cytochrome c using vibrational coherence spectroscopy |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4059251/ https://www.ncbi.nlm.nih.gov/pubmed/24823442 http://dx.doi.org/10.1021/jp501298c |
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