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OccuPeak: ChIP-Seq Peak Calling Based on Internal Background Modelling
ChIP-seq has become a major tool for the genome-wide identification of transcription factor binding or histone modification sites. Most peak-calling algorithms require input control datasets to model the occurrence of background reads to account for local sequencing and GC bias. However, the GC-cont...
Autores principales: | de Boer, Bouke A., van Duijvenboden, Karel, van den Boogaard, Malou, Christoffels, Vincent M., Barnett, Phil, Ruijter, Jan M. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4061025/ https://www.ncbi.nlm.nih.gov/pubmed/24936875 http://dx.doi.org/10.1371/journal.pone.0099844 |
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