Cargando…

A Method for Detecting Long Non-Coding RNAs with Tiled RNA Expression Microarrays

Long non-coding ribonucleic acids (lncRNAs) have been proposed as biomarkers in prostate cancer. This paper proposes a selection method which uses data from tiled microarrays to identify relatively long regions of moderate expression independent of the microarray platform and probe design. The metho...

Descripción completa

Detalles Bibliográficos
Autores principales:	Lund, Sigrun Helga, Gudbjartsson, Daniel Fannar, Rafnar, Thorunn, Sigurdsson, Asgeir, Gudjonsson, Sigurjon Axel, Gudmundsson, Julius, Stefansson, Kari, Stefansson, Gunnar
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2014
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4061049/ https://www.ncbi.nlm.nih.gov/pubmed/24937006 http://dx.doi.org/10.1371/journal.pone.0099899

Ejemplares similares

GORpipe: a query tool for working with sequence data based on a Genomic Ordered Relational (GOR) architecture
por: Guðbjartsson, Hákon, et al.
Publicado: (2016)

Genome-wide association identifies seven loci for pelvic organ prolapse in Iceland and the UK Biobank
por: Olafsdottir, Thorhildur, et al.
Publicado: (2020)

Genome-wide associations for benign prostatic hyperplasia reveal a genetic correlation with serum levels of PSA
por: Gudmundsson, Julius, et al.
Publicado: (2018)

Rate of de novo mutations, father’s age, and disease risk
por: Kong, Augustine, et al.
Publicado: (2012)

Sequence variants in the PTCH1 gene associate with spine bone mineral density and osteoporotic fractures
por: Styrkarsdottir, Unnur, et al.
Publicado: (2016)

Predicting the probability of death using proteomics
por: Eiriksdottir, Thjodbjorg, et al.
Publicado: (2021)

Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis
por: Sigurdsson, Snaevar, et al.
Publicado: (2017)

Genetic variants associated with platelet count are predictive of human disease and physiological markers
por: Mikaelsdottir, Evgenia, et al.
Publicado: (2021)

Large-scale plasma proteomics comparisons through genetics and disease associations
por: Eldjarn, Grimur Hjorleifsson, et al.
Publicado: (2023)

Sequence variants from whole genome sequencing a large group of Icelanders
por: Gudbjartsson, Daniel F, et al.
Publicado: (2015)

A homozygous loss-of-function mutation leading to CYBC1 deficiency causes chronic granulomatous disease
por: Arnadottir, Gudny A., et al.
Publicado: (2018)

Meta-analysis of erosive hand osteoarthritis identifies four common variants that associate with relatively large effect
por: Styrkarsdottir, Unnur, et al.
Publicado: (2023)

The CRTAC1 Protein in Plasma Is Associated With Osteoarthritis and Predicts Progression to Joint Replacement: A Large‐Scale Proteomics Scan in Iceland
por: Styrkarsdottir, Unnur, et al.
Publicado: (2021)

New basal cell carcinoma susceptibility loci
por: Stacey, Simon N., et al.
Publicado: (2015)

Compound heterozygous mutations in UBA5 causing early-onset epileptic encephalopathy in two sisters
por: Arnadottir, Gudny A., et al.
Publicado: (2017)

The mother’s risk of premature death after child loss across two centuries
por: Valdimarsdóttir, Unnur A, et al.
Publicado: (2019)

A PRPH splice-donor variant associates with reduced sural nerve amplitude and risk of peripheral neuropathy
por: Bjornsdottir, Gyda, et al.
Publicado: (2019)

Variants associating with uterine leiomyoma highlight genetic background shared by various cancers and hormone-related traits
por: Rafnar, Thorunn, et al.
Publicado: (2018)

Germline sequence variants in TGM3 and RGS22 confer risk of basal cell carcinoma
por: Stacey, Simon N., et al.
Publicado: (2014)

Epigenetic and genetic components of height regulation
por: Benonisdottir, Stefania, et al.
Publicado: (2016)

Comprehensive population-wide analysis of Lynch syndrome in Iceland reveals founder mutations in MSH6 and PMS2
por: Haraldsdottir, Sigurdis, et al.
Publicado: (2017)

Polygenic risk scores for schizophrenia and bipolar disorder associate with addiction
por: Reginsson, Gunnar W., et al.
Publicado: (2017)

Allele frequency of variants reported to cause adenine phosphoribosyltransferase deficiency
por: Runolfsdottir, Hrafnhildur L., et al.
Publicado: (2021)

Sequence variants affecting the genome-wide rate of germline microsatellite mutations
por: Kristmundsdottir, Snaedis, et al.
Publicado: (2023)

A Splice Region Variant in LDLR Lowers Non-high Density Lipoprotein Cholesterol and Protects against Coronary Artery Disease
por: Gretarsdottir, Solveig, et al.
Publicado: (2015)

Reproductive fitness and genetic risk of psychiatric disorders in the general population
por: Mullins, Niamh, et al.
Publicado: (2017)

CpG promoter hypo-methylation and up-regulation of microRNA-190b in hormone receptor-positive breast cancer
por: Frick, Elisabet, et al.
Publicado: (2019)

Sequence variant at 8q24.21 associates with sciatica caused by lumbar disc herniation
por: Bjornsdottir, Gyda, et al.
Publicado: (2017)

The sequences of 150,119 genomes in the UK Biobank
por: Halldorsson, Bjarni V., et al.
Publicado: (2022)

Whole genome characterization of sequence diversity of 15,220 Icelanders
por: Jónsson, Hákon, et al.
Publicado: (2017)

Insertion of an SVA-E retrotransposon into the CASP8 gene is associated with protection against prostate cancer
por: Stacey, Simon N., et al.
Publicado: (2016)

Histopathology and levels of proteins in plasma associate with survival after colorectal cancer diagnosis
por: Magnusson, Magnus I., et al.
Publicado: (2023)

Analysis of Antisense Expression by Whole Genome Tiling Microarrays and siRNAs Suggests Mis-Annotation of Arabidopsis Orphan Protein-Coding Genes
por: Richardson, Casey R., et al.
Publicado: (2010)

Thirty novel sequence variants impacting human intracranial volume
por: Nawaz, Muhammad Sulaman, et al.
Publicado: (2022)

A genome-wide association study yields five novel thyroid cancer risk loci
por: Gudmundsson, Julius, et al.
Publicado: (2017)

Getting Started in Tiling Microarray Analysis
por: Liu, X. Shirley
Publicado: (2007)

Common variants upstream of KDR encoding VEGFR2 and in TTC39B associate with endometriosis
por: Steinthorsdottir, Valgerdur, et al.
Publicado: (2016)

Sequence variant at 4q25 near PITX2 associates with appendicitis
por: Kristjansson, Ragnar P., et al.
Publicado: (2017)

Clinical trial: free fatty acid suppositories compared with enema as bowel preparation for flexible sigmoidoscopy
por: Ormarsson, Orri Thor, et al.
Publicado: (2015)

HLA alleles, disease severity, and age associate with T-cell responses following infection with SARS-CoV-2
por: Olafsdottir, Thorunn A., et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_502e91t068l0ih3fm8q3ueuon1