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Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597
Rhizobium leguminosarum bv. trifolii strain WSM597 is an aerobic, motile, Gram-negative, non-spore-forming rod isolated from a root nodule of the annual clover Trifolium pallidum L. growing at Glencoe Research Station near Tacuarembó, Uruguay. This strain is generally ineffective for nitrogen (N(2))...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4062625/ https://www.ncbi.nlm.nih.gov/pubmed/24976883 http://dx.doi.org/10.4056/sigs.4508258 |
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author | Reeve, Wayne Terpolilli, Jason Melino, Vanessa Ardley, Julie Tian, Rui De Meyer, Sofie Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Held, Brittany Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Ivanova, Natalia Ovchinnikova, Galina Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos |
author_facet | Reeve, Wayne Terpolilli, Jason Melino, Vanessa Ardley, Julie Tian, Rui De Meyer, Sofie Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Held, Brittany Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Ivanova, Natalia Ovchinnikova, Galina Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos |
author_sort | Reeve, Wayne |
collection | PubMed |
description | Rhizobium leguminosarum bv. trifolii strain WSM597 is an aerobic, motile, Gram-negative, non-spore-forming rod isolated from a root nodule of the annual clover Trifolium pallidum L. growing at Glencoe Research Station near Tacuarembó, Uruguay. This strain is generally ineffective for nitrogen (N(2)) fixation with clovers of Mediterranean, North American and African origin, but is effective on the South American perennial clover T. polymorphum Poir. Here we describe the features of R. leguminosarum bv. trifolii strain WSM597, together with genome sequence information and annotation. The 7,634,384 bp high-quality-draft genome is arranged in 2 scaffolds of 53 contigs, contains 7,394 protein-coding genes and 87 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program. |
format | Online Article Text |
id | pubmed-4062625 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-40626252014-06-27 Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597 Reeve, Wayne Terpolilli, Jason Melino, Vanessa Ardley, Julie Tian, Rui De Meyer, Sofie Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Held, Brittany Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Ivanova, Natalia Ovchinnikova, Galina Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Stand Genomic Sci Short Genome Reports Rhizobium leguminosarum bv. trifolii strain WSM597 is an aerobic, motile, Gram-negative, non-spore-forming rod isolated from a root nodule of the annual clover Trifolium pallidum L. growing at Glencoe Research Station near Tacuarembó, Uruguay. This strain is generally ineffective for nitrogen (N(2)) fixation with clovers of Mediterranean, North American and African origin, but is effective on the South American perennial clover T. polymorphum Poir. Here we describe the features of R. leguminosarum bv. trifolii strain WSM597, together with genome sequence information and annotation. The 7,634,384 bp high-quality-draft genome is arranged in 2 scaffolds of 53 contigs, contains 7,394 protein-coding genes and 87 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program. Michigan State University 2013-12-15 /pmc/articles/PMC4062625/ /pubmed/24976883 http://dx.doi.org/10.4056/sigs.4508258 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Reeve, Wayne Terpolilli, Jason Melino, Vanessa Ardley, Julie Tian, Rui De Meyer, Sofie Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Held, Brittany Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Ivanova, Natalia Ovchinnikova, Galina Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597 |
title | Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597 |
title_full | Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597 |
title_fullStr | Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597 |
title_full_unstemmed | Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597 |
title_short | Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597 |
title_sort | genome sequence of the south american clover-nodulating rhizobium leguminosarum bv. trifolii strain wsm597 |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4062625/ https://www.ncbi.nlm.nih.gov/pubmed/24976883 http://dx.doi.org/10.4056/sigs.4508258 |
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