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Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012.
Rhizobium leguminosarum bv. trifolii WSM2012 (syn. MAR1468) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an ineffective root nodule recovered from the roots of the annual clover Trifolium rueppellianum Fresen growing in Ethiopia. WSM2012 has a narrow, specialize...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Michigan State University
2013
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4062638/ https://www.ncbi.nlm.nih.gov/pubmed/24976885 http://dx.doi.org/10.4056/sigs.4528262 |
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| author | Reeve, Wayne Melino, Vanessa Ardley, Julie Tian, Rui De Meyer, Sofie Terpolilli, Jason Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Held, Brittany Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Mikhailova, Natalia Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos |
| author_facet | Reeve, Wayne Melino, Vanessa Ardley, Julie Tian, Rui De Meyer, Sofie Terpolilli, Jason Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Held, Brittany Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Mikhailova, Natalia Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos |
| author_sort | Reeve, Wayne |
| collection | PubMed |
| description | Rhizobium leguminosarum bv. trifolii WSM2012 (syn. MAR1468) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an ineffective root nodule recovered from the roots of the annual clover Trifolium rueppellianum Fresen growing in Ethiopia. WSM2012 has a narrow, specialized host range for N(2)-fixation. Here we describe the features of R. leguminosarum bv. trifolii strain WSM2012, together with genome sequence information and annotation. The 7,180,565 bp high-quality-draft genome is arranged into 6 scaffolds of 68 contigs, contains 7,080 protein-coding genes and 86 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program. |
| format | Online Article Text |
| id | pubmed-4062638 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2013 |
| publisher | Michigan State University |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-40626382014-06-27 Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. Reeve, Wayne Melino, Vanessa Ardley, Julie Tian, Rui De Meyer, Sofie Terpolilli, Jason Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Held, Brittany Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Mikhailova, Natalia Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Stand Genomic Sci Short Genome Reports Rhizobium leguminosarum bv. trifolii WSM2012 (syn. MAR1468) is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an ineffective root nodule recovered from the roots of the annual clover Trifolium rueppellianum Fresen growing in Ethiopia. WSM2012 has a narrow, specialized host range for N(2)-fixation. Here we describe the features of R. leguminosarum bv. trifolii strain WSM2012, together with genome sequence information and annotation. The 7,180,565 bp high-quality-draft genome is arranged into 6 scaffolds of 68 contigs, contains 7,080 protein-coding genes and 86 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program. Michigan State University 2013-12-15 /pmc/articles/PMC4062638/ /pubmed/24976885 http://dx.doi.org/10.4056/sigs.4528262 Text en Copyright © retained by original authors http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
| spellingShingle | Short Genome Reports Reeve, Wayne Melino, Vanessa Ardley, Julie Tian, Rui De Meyer, Sofie Terpolilli, Jason Tiwari, Ravi Yates, Ronald O’Hara, Graham Howieson, John Ninawi, Mohamed Held, Brittany Bruce, David Detter, Chris Tapia, Roxanne Han, Cliff Wei, Chia-Lin Huntemann, Marcel Han, James Chen, I-Min Mavromatis, Konstantinos Markowitz, Victor Szeto, Ernest Ivanova, Natalia Mikhailova, Natalia Pagani, Ioanna Pati, Amrita Goodwin, Lynne Woyke, Tanja Kyrpides, Nikos Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. |
| title | Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. |
| title_full | Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. |
| title_fullStr | Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. |
| title_full_unstemmed | Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. |
| title_short | Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. |
| title_sort | genome sequence of the trifolium rueppellianum -nodulating rhizobium leguminosarum bv. trifolii strain wsm2012. |
| topic | Short Genome Reports |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4062638/ https://www.ncbi.nlm.nih.gov/pubmed/24976885 http://dx.doi.org/10.4056/sigs.4528262 |
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