Cargando…
BIOFRAG – a new database for analyzing BIOdiversity responses to forest FRAGmentation
Habitat fragmentation studies have produced complex results that are challenging to synthesize. Inconsistencies among studies may result from variation in the choice of landscape metrics and response variables, which is often compounded by a lack of key statistical or methodological information. Col...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BlackWell Publishing Ltd
2014
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4063456/ https://www.ncbi.nlm.nih.gov/pubmed/24967073 http://dx.doi.org/10.1002/ece3.1036 |
_version_ | 1782321793463222272 |
---|---|
author | Pfeifer, Marion Lefebvre, Veronique Gardner, Toby A Arroyo-Rodriguez, Victor Baeten, Lander Banks-Leite, Cristina Barlow, Jos Betts, Matthew G Brunet, Joerg Cerezo, Alexis Cisneros, Laura M Collard, Stuart D'Cruze, Neil da Silva Motta, Catarina Duguay, Stephanie Eggermont, Hilde Eigenbrod, Felix Hadley, Adam S Hanson, Thor R Hawes, Joseph E Heartsill Scalley, Tamara Klingbeil, Brian T Kolb, Annette Kormann, Urs Kumar, Sunil Lachat, Thibault Lakeman Fraser, Poppy Lantschner, Victoria Laurance, William F Leal, Inara R Lens, Luc Marsh, Charles J Medina-Rangel, Guido F Melles, Stephanie Mezger, Dirk Oldekop, Johan A Overal, William L Owen, Charlotte Peres, Carlos A Phalan, Ben Pidgeon, Anna M Pilia, Oriana Possingham, Hugh P Possingham, Max L Raheem, Dinarzarde C Ribeiro, Danilo B Ribeiro Neto, Jose D Douglas Robinson, W Robinson, Richard Rytwinski, Trina Scherber, Christoph Slade, Eleanor M Somarriba, Eduardo Stouffer, Philip C Struebig, Matthew J Tylianakis, Jason M Tscharntke, Teja Tyre, Andrew J Urbina Cardona, Jose N Vasconcelos, Heraldo L Wearn, Oliver Wells, Konstans Willig, Michael R Wood, Eric Young, Richard P Bradley, Andrew V Ewers, Robert M |
author_facet | Pfeifer, Marion Lefebvre, Veronique Gardner, Toby A Arroyo-Rodriguez, Victor Baeten, Lander Banks-Leite, Cristina Barlow, Jos Betts, Matthew G Brunet, Joerg Cerezo, Alexis Cisneros, Laura M Collard, Stuart D'Cruze, Neil da Silva Motta, Catarina Duguay, Stephanie Eggermont, Hilde Eigenbrod, Felix Hadley, Adam S Hanson, Thor R Hawes, Joseph E Heartsill Scalley, Tamara Klingbeil, Brian T Kolb, Annette Kormann, Urs Kumar, Sunil Lachat, Thibault Lakeman Fraser, Poppy Lantschner, Victoria Laurance, William F Leal, Inara R Lens, Luc Marsh, Charles J Medina-Rangel, Guido F Melles, Stephanie Mezger, Dirk Oldekop, Johan A Overal, William L Owen, Charlotte Peres, Carlos A Phalan, Ben Pidgeon, Anna M Pilia, Oriana Possingham, Hugh P Possingham, Max L Raheem, Dinarzarde C Ribeiro, Danilo B Ribeiro Neto, Jose D Douglas Robinson, W Robinson, Richard Rytwinski, Trina Scherber, Christoph Slade, Eleanor M Somarriba, Eduardo Stouffer, Philip C Struebig, Matthew J Tylianakis, Jason M Tscharntke, Teja Tyre, Andrew J Urbina Cardona, Jose N Vasconcelos, Heraldo L Wearn, Oliver Wells, Konstans Willig, Michael R Wood, Eric Young, Richard P Bradley, Andrew V Ewers, Robert M |
author_sort | Pfeifer, Marion |
collection | PubMed |
description | Habitat fragmentation studies have produced complex results that are challenging to synthesize. Inconsistencies among studies may result from variation in the choice of landscape metrics and response variables, which is often compounded by a lack of key statistical or methodological information. Collating primary datasets on biodiversity responses to fragmentation in a consistent and flexible database permits simple data retrieval for subsequent analyses. We present a relational database that links such field data to taxonomic nomenclature, spatial and temporal plot attributes, and environmental characteristics. Field assessments include measurements of the response(s) (e.g., presence, abundance, ground cover) of one or more species linked to plots in fragments within a partially forested landscape. The database currently holds 9830 unique species recorded in plots of 58 unique landscapes in six of eight realms: mammals 315, birds 1286, herptiles 460, insects 4521, spiders 204, other arthropods 85, gastropods 70, annelids 8, platyhelminthes 4, Onychophora 2, vascular plants 2112, nonvascular plants and lichens 320, and fungi 449. Three landscapes were sampled as long-term time series (>10 years). Seven hundred and eleven species are found in two or more landscapes. Consolidating the substantial amount of primary data available on biodiversity responses to fragmentation in the context of land-use change and natural disturbances is an essential part of understanding the effects of increasing anthropogenic pressures on land. The consistent format of this database facilitates testing of generalizations concerning biologic responses to fragmentation across diverse systems and taxa. It also allows the re-examination of existing datasets with alternative landscape metrics and robust statistical methods, for example, helping to address pseudo-replication problems. The database can thus help researchers in producing broad syntheses of the effects of land use. The database is dynamic and inclusive, and contributions from individual and large-scale data-collection efforts are welcome. |
format | Online Article Text |
id | pubmed-4063456 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BlackWell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-40634562014-06-25 BIOFRAG – a new database for analyzing BIOdiversity responses to forest FRAGmentation Pfeifer, Marion Lefebvre, Veronique Gardner, Toby A Arroyo-Rodriguez, Victor Baeten, Lander Banks-Leite, Cristina Barlow, Jos Betts, Matthew G Brunet, Joerg Cerezo, Alexis Cisneros, Laura M Collard, Stuart D'Cruze, Neil da Silva Motta, Catarina Duguay, Stephanie Eggermont, Hilde Eigenbrod, Felix Hadley, Adam S Hanson, Thor R Hawes, Joseph E Heartsill Scalley, Tamara Klingbeil, Brian T Kolb, Annette Kormann, Urs Kumar, Sunil Lachat, Thibault Lakeman Fraser, Poppy Lantschner, Victoria Laurance, William F Leal, Inara R Lens, Luc Marsh, Charles J Medina-Rangel, Guido F Melles, Stephanie Mezger, Dirk Oldekop, Johan A Overal, William L Owen, Charlotte Peres, Carlos A Phalan, Ben Pidgeon, Anna M Pilia, Oriana Possingham, Hugh P Possingham, Max L Raheem, Dinarzarde C Ribeiro, Danilo B Ribeiro Neto, Jose D Douglas Robinson, W Robinson, Richard Rytwinski, Trina Scherber, Christoph Slade, Eleanor M Somarriba, Eduardo Stouffer, Philip C Struebig, Matthew J Tylianakis, Jason M Tscharntke, Teja Tyre, Andrew J Urbina Cardona, Jose N Vasconcelos, Heraldo L Wearn, Oliver Wells, Konstans Willig, Michael R Wood, Eric Young, Richard P Bradley, Andrew V Ewers, Robert M Ecol Evol Original Research Habitat fragmentation studies have produced complex results that are challenging to synthesize. Inconsistencies among studies may result from variation in the choice of landscape metrics and response variables, which is often compounded by a lack of key statistical or methodological information. Collating primary datasets on biodiversity responses to fragmentation in a consistent and flexible database permits simple data retrieval for subsequent analyses. We present a relational database that links such field data to taxonomic nomenclature, spatial and temporal plot attributes, and environmental characteristics. Field assessments include measurements of the response(s) (e.g., presence, abundance, ground cover) of one or more species linked to plots in fragments within a partially forested landscape. The database currently holds 9830 unique species recorded in plots of 58 unique landscapes in six of eight realms: mammals 315, birds 1286, herptiles 460, insects 4521, spiders 204, other arthropods 85, gastropods 70, annelids 8, platyhelminthes 4, Onychophora 2, vascular plants 2112, nonvascular plants and lichens 320, and fungi 449. Three landscapes were sampled as long-term time series (>10 years). Seven hundred and eleven species are found in two or more landscapes. Consolidating the substantial amount of primary data available on biodiversity responses to fragmentation in the context of land-use change and natural disturbances is an essential part of understanding the effects of increasing anthropogenic pressures on land. The consistent format of this database facilitates testing of generalizations concerning biologic responses to fragmentation across diverse systems and taxa. It also allows the re-examination of existing datasets with alternative landscape metrics and robust statistical methods, for example, helping to address pseudo-replication problems. The database can thus help researchers in producing broad syntheses of the effects of land use. The database is dynamic and inclusive, and contributions from individual and large-scale data-collection efforts are welcome. BlackWell Publishing Ltd 2014-05 2014-03-27 /pmc/articles/PMC4063456/ /pubmed/24967073 http://dx.doi.org/10.1002/ece3.1036 Text en © 2014 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. http://creativecommons.org/licenses/by/3.0/ This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Pfeifer, Marion Lefebvre, Veronique Gardner, Toby A Arroyo-Rodriguez, Victor Baeten, Lander Banks-Leite, Cristina Barlow, Jos Betts, Matthew G Brunet, Joerg Cerezo, Alexis Cisneros, Laura M Collard, Stuart D'Cruze, Neil da Silva Motta, Catarina Duguay, Stephanie Eggermont, Hilde Eigenbrod, Felix Hadley, Adam S Hanson, Thor R Hawes, Joseph E Heartsill Scalley, Tamara Klingbeil, Brian T Kolb, Annette Kormann, Urs Kumar, Sunil Lachat, Thibault Lakeman Fraser, Poppy Lantschner, Victoria Laurance, William F Leal, Inara R Lens, Luc Marsh, Charles J Medina-Rangel, Guido F Melles, Stephanie Mezger, Dirk Oldekop, Johan A Overal, William L Owen, Charlotte Peres, Carlos A Phalan, Ben Pidgeon, Anna M Pilia, Oriana Possingham, Hugh P Possingham, Max L Raheem, Dinarzarde C Ribeiro, Danilo B Ribeiro Neto, Jose D Douglas Robinson, W Robinson, Richard Rytwinski, Trina Scherber, Christoph Slade, Eleanor M Somarriba, Eduardo Stouffer, Philip C Struebig, Matthew J Tylianakis, Jason M Tscharntke, Teja Tyre, Andrew J Urbina Cardona, Jose N Vasconcelos, Heraldo L Wearn, Oliver Wells, Konstans Willig, Michael R Wood, Eric Young, Richard P Bradley, Andrew V Ewers, Robert M BIOFRAG – a new database for analyzing BIOdiversity responses to forest FRAGmentation |
title | BIOFRAG – a new database for analyzing BIOdiversity responses to forest FRAGmentation |
title_full | BIOFRAG – a new database for analyzing BIOdiversity responses to forest FRAGmentation |
title_fullStr | BIOFRAG – a new database for analyzing BIOdiversity responses to forest FRAGmentation |
title_full_unstemmed | BIOFRAG – a new database for analyzing BIOdiversity responses to forest FRAGmentation |
title_short | BIOFRAG – a new database for analyzing BIOdiversity responses to forest FRAGmentation |
title_sort | biofrag – a new database for analyzing biodiversity responses to forest fragmentation |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4063456/ https://www.ncbi.nlm.nih.gov/pubmed/24967073 http://dx.doi.org/10.1002/ece3.1036 |
work_keys_str_mv | AT pfeifermarion biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT lefebvreveronique biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT gardnertobya biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT arroyorodriguezvictor biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT baetenlander biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT banksleitecristina biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT barlowjos biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT bettsmatthewg biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT brunetjoerg biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT cerezoalexis biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT cisneroslauram biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT collardstuart biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT dcruzeneil biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT dasilvamottacatarina biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT duguaystephanie biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT eggermonthilde biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT eigenbrodfelix biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT hadleyadams biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT hansonthorr biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT hawesjosephe biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT heartsillscalleytamara biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT klingbeilbriant biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT kolbannette biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT kormannurs biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT kumarsunil biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT lachatthibault biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT lakemanfraserpoppy biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT lantschnervictoria biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT laurancewilliamf biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT lealinarar biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT lensluc biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT marshcharlesj biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT medinarangelguidof biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT mellesstephanie biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT mezgerdirk biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT oldekopjohana biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT overalwilliaml biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT owencharlotte biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT perescarlosa biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT phalanben biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT pidgeonannam biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT piliaoriana biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT possinghamhughp biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT possinghammaxl biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT raheemdinarzardec biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT ribeirodanilob biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT ribeironetojosed biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT douglasrobinsonw biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT robinsonrichard biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT rytwinskitrina biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT scherberchristoph biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT sladeeleanorm biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT somarribaeduardo biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT stoufferphilipc biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT struebigmatthewj biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT tylianakisjasonm biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT tscharntketeja biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT tyreandrewj biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT urbinacardonajosen biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT vasconcelosheraldol biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT wearnoliver biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT wellskonstans biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT willigmichaelr biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT wooderic biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT youngrichardp biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT bradleyandrewv biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation AT ewersrobertm biofraganewdatabaseforanalyzingbiodiversityresponsestoforestfragmentation |