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Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena

Spider venom comprises a mixture of compounds with diverse biological activities, which are used to capture prey and defend against predators. The peptide components bind a broad range of cellular targets with high affinity and selectivity, and appear to have remarkable structural diversity. Althoug...

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Autores principales: Zhang, Yiya, Huang, Yong, He, Quanze, Liu, Jinyan, Luo, Ji, Zhu, Li, Lu, Shanshan, Huang, Pengfei, Chen, Xinyi, Zeng, Xiongzhi, Liang, Songping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4065081/
https://www.ncbi.nlm.nih.gov/pubmed/24949878
http://dx.doi.org/10.1371/journal.pone.0100682
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author Zhang, Yiya
Huang, Yong
He, Quanze
Liu, Jinyan
Luo, Ji
Zhu, Li
Lu, Shanshan
Huang, Pengfei
Chen, Xinyi
Zeng, Xiongzhi
Liang, Songping
author_facet Zhang, Yiya
Huang, Yong
He, Quanze
Liu, Jinyan
Luo, Ji
Zhu, Li
Lu, Shanshan
Huang, Pengfei
Chen, Xinyi
Zeng, Xiongzhi
Liang, Songping
author_sort Zhang, Yiya
collection PubMed
description Spider venom comprises a mixture of compounds with diverse biological activities, which are used to capture prey and defend against predators. The peptide components bind a broad range of cellular targets with high affinity and selectivity, and appear to have remarkable structural diversity. Although spider venoms have been intensively investigated over the past few decades, venomic strategies to date have generally focused on high-abundance peptides. In addition, the lack of complete spider genomes or representative cDNA libraries has presented significant limitations for researchers interested in molecular diversity and understanding the genetic mechanisms of toxin evolution. In the present study, second-generation sequencing technologies, combined with proteomic analysis, were applied to determine the diverse peptide toxins in venom of the Chinese bird spider Ornithoctonus huwena. In total, 626 toxin precursor sequences were retrieved from transcriptomic data. All toxin precursors clustered into 16 gene superfamilies, which included six novel superfamilies and six novel cysteine patterns. A surprisingly high number of hypermutations and fragment insertions/deletions were detected, which accounted for the majority of toxin gene sequences with low-level expression. These mutations contribute to the formation of diverse cysteine patterns and highly variable isoforms. Furthermore, intraspecific venom variability, in combination with variable transcripts and peptide processing, contributes to the hypervariability of toxins in venoms, and associated rapid and adaptive evolution of toxins for prey capture and defense.
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spelling pubmed-40650812014-06-25 Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena Zhang, Yiya Huang, Yong He, Quanze Liu, Jinyan Luo, Ji Zhu, Li Lu, Shanshan Huang, Pengfei Chen, Xinyi Zeng, Xiongzhi Liang, Songping PLoS One Research Article Spider venom comprises a mixture of compounds with diverse biological activities, which are used to capture prey and defend against predators. The peptide components bind a broad range of cellular targets with high affinity and selectivity, and appear to have remarkable structural diversity. Although spider venoms have been intensively investigated over the past few decades, venomic strategies to date have generally focused on high-abundance peptides. In addition, the lack of complete spider genomes or representative cDNA libraries has presented significant limitations for researchers interested in molecular diversity and understanding the genetic mechanisms of toxin evolution. In the present study, second-generation sequencing technologies, combined with proteomic analysis, were applied to determine the diverse peptide toxins in venom of the Chinese bird spider Ornithoctonus huwena. In total, 626 toxin precursor sequences were retrieved from transcriptomic data. All toxin precursors clustered into 16 gene superfamilies, which included six novel superfamilies and six novel cysteine patterns. A surprisingly high number of hypermutations and fragment insertions/deletions were detected, which accounted for the majority of toxin gene sequences with low-level expression. These mutations contribute to the formation of diverse cysteine patterns and highly variable isoforms. Furthermore, intraspecific venom variability, in combination with variable transcripts and peptide processing, contributes to the hypervariability of toxins in venoms, and associated rapid and adaptive evolution of toxins for prey capture and defense. Public Library of Science 2014-06-20 /pmc/articles/PMC4065081/ /pubmed/24949878 http://dx.doi.org/10.1371/journal.pone.0100682 Text en © 2014 Zhang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Zhang, Yiya
Huang, Yong
He, Quanze
Liu, Jinyan
Luo, Ji
Zhu, Li
Lu, Shanshan
Huang, Pengfei
Chen, Xinyi
Zeng, Xiongzhi
Liang, Songping
Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
title Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
title_full Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
title_fullStr Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
title_full_unstemmed Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
title_short Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
title_sort toxin diversity revealed by a transcriptomic study of ornithoctonus huwena
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4065081/
https://www.ncbi.nlm.nih.gov/pubmed/24949878
http://dx.doi.org/10.1371/journal.pone.0100682
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