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Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
Spider venom comprises a mixture of compounds with diverse biological activities, which are used to capture prey and defend against predators. The peptide components bind a broad range of cellular targets with high affinity and selectivity, and appear to have remarkable structural diversity. Althoug...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4065081/ https://www.ncbi.nlm.nih.gov/pubmed/24949878 http://dx.doi.org/10.1371/journal.pone.0100682 |
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author | Zhang, Yiya Huang, Yong He, Quanze Liu, Jinyan Luo, Ji Zhu, Li Lu, Shanshan Huang, Pengfei Chen, Xinyi Zeng, Xiongzhi Liang, Songping |
author_facet | Zhang, Yiya Huang, Yong He, Quanze Liu, Jinyan Luo, Ji Zhu, Li Lu, Shanshan Huang, Pengfei Chen, Xinyi Zeng, Xiongzhi Liang, Songping |
author_sort | Zhang, Yiya |
collection | PubMed |
description | Spider venom comprises a mixture of compounds with diverse biological activities, which are used to capture prey and defend against predators. The peptide components bind a broad range of cellular targets with high affinity and selectivity, and appear to have remarkable structural diversity. Although spider venoms have been intensively investigated over the past few decades, venomic strategies to date have generally focused on high-abundance peptides. In addition, the lack of complete spider genomes or representative cDNA libraries has presented significant limitations for researchers interested in molecular diversity and understanding the genetic mechanisms of toxin evolution. In the present study, second-generation sequencing technologies, combined with proteomic analysis, were applied to determine the diverse peptide toxins in venom of the Chinese bird spider Ornithoctonus huwena. In total, 626 toxin precursor sequences were retrieved from transcriptomic data. All toxin precursors clustered into 16 gene superfamilies, which included six novel superfamilies and six novel cysteine patterns. A surprisingly high number of hypermutations and fragment insertions/deletions were detected, which accounted for the majority of toxin gene sequences with low-level expression. These mutations contribute to the formation of diverse cysteine patterns and highly variable isoforms. Furthermore, intraspecific venom variability, in combination with variable transcripts and peptide processing, contributes to the hypervariability of toxins in venoms, and associated rapid and adaptive evolution of toxins for prey capture and defense. |
format | Online Article Text |
id | pubmed-4065081 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-40650812014-06-25 Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena Zhang, Yiya Huang, Yong He, Quanze Liu, Jinyan Luo, Ji Zhu, Li Lu, Shanshan Huang, Pengfei Chen, Xinyi Zeng, Xiongzhi Liang, Songping PLoS One Research Article Spider venom comprises a mixture of compounds with diverse biological activities, which are used to capture prey and defend against predators. The peptide components bind a broad range of cellular targets with high affinity and selectivity, and appear to have remarkable structural diversity. Although spider venoms have been intensively investigated over the past few decades, venomic strategies to date have generally focused on high-abundance peptides. In addition, the lack of complete spider genomes or representative cDNA libraries has presented significant limitations for researchers interested in molecular diversity and understanding the genetic mechanisms of toxin evolution. In the present study, second-generation sequencing technologies, combined with proteomic analysis, were applied to determine the diverse peptide toxins in venom of the Chinese bird spider Ornithoctonus huwena. In total, 626 toxin precursor sequences were retrieved from transcriptomic data. All toxin precursors clustered into 16 gene superfamilies, which included six novel superfamilies and six novel cysteine patterns. A surprisingly high number of hypermutations and fragment insertions/deletions were detected, which accounted for the majority of toxin gene sequences with low-level expression. These mutations contribute to the formation of diverse cysteine patterns and highly variable isoforms. Furthermore, intraspecific venom variability, in combination with variable transcripts and peptide processing, contributes to the hypervariability of toxins in venoms, and associated rapid and adaptive evolution of toxins for prey capture and defense. Public Library of Science 2014-06-20 /pmc/articles/PMC4065081/ /pubmed/24949878 http://dx.doi.org/10.1371/journal.pone.0100682 Text en © 2014 Zhang et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Zhang, Yiya Huang, Yong He, Quanze Liu, Jinyan Luo, Ji Zhu, Li Lu, Shanshan Huang, Pengfei Chen, Xinyi Zeng, Xiongzhi Liang, Songping Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena |
title | Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
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title_full | Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
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title_fullStr | Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
|
title_full_unstemmed | Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
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title_short | Toxin Diversity Revealed by a Transcriptomic Study of Ornithoctonus huwena
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title_sort | toxin diversity revealed by a transcriptomic study of ornithoctonus huwena |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4065081/ https://www.ncbi.nlm.nih.gov/pubmed/24949878 http://dx.doi.org/10.1371/journal.pone.0100682 |
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