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Molecular designing and in silico evaluation of darunavir derivatives as anticancer agents

Darunavir is a synthetic nonpeptidic protease inhibitor which has been tested for anticancer properties. To deduce and enhance the anticancer activity of the Darunavir, we have modified its reactive moiety in an effective way. We designed 9 analogues in ChemBioOffice 2010 and minimized using the Lig...

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Autores principales: Mahto, Manoj kumar, Yellapu, Nanda Kumar, Kilaru, Ravendra Babu, Chamarthi, Naga Raju, Bhaskar, Matcha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Biomedical Informatics 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4070053/
https://www.ncbi.nlm.nih.gov/pubmed/24966524
http://dx.doi.org/10.6026/97320630010221
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author Mahto, Manoj kumar
Yellapu, Nanda Kumar
Kilaru, Ravendra Babu
Chamarthi, Naga Raju
Bhaskar, Matcha
author_facet Mahto, Manoj kumar
Yellapu, Nanda Kumar
Kilaru, Ravendra Babu
Chamarthi, Naga Raju
Bhaskar, Matcha
author_sort Mahto, Manoj kumar
collection PubMed
description Darunavir is a synthetic nonpeptidic protease inhibitor which has been tested for anticancer properties. To deduce and enhance the anticancer activity of the Darunavir, we have modified its reactive moiety in an effective way. We designed 9 analogues in ChemBioOffice 2010 and minimized using the LigPrep tool of Schrödinger 2011. These analogues can obstruct the activity of other signalling pathways which are implicated in many tumors. Results of the QikProp showed that all the analogues lied in the specified range of all the pharmacokinetic (ADMET) properties required to become the successful drug. Docking study was performed to test its anticancer activity against the biomarkers of the five main types of cancers i.e. bone, brain, breast, colon and skin cancer. Grid was generated for each oncoproteins by specifying the active site amino acids. The binding model of best scoring analogue with each protein was assessed from their G-scores and disclosed by docking analysis using the XP visualizer tool. An analysis of the receptor-ligand interaction studies revealed that these nine Darunavir analogues are active against all cancer biomarkers and have the features to prove themselves as anticancer drugs, further to be synthesized and tested against the cell lines.
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spelling pubmed-40700532014-06-25 Molecular designing and in silico evaluation of darunavir derivatives as anticancer agents Mahto, Manoj kumar Yellapu, Nanda Kumar Kilaru, Ravendra Babu Chamarthi, Naga Raju Bhaskar, Matcha Bioinformation Hypothesis Darunavir is a synthetic nonpeptidic protease inhibitor which has been tested for anticancer properties. To deduce and enhance the anticancer activity of the Darunavir, we have modified its reactive moiety in an effective way. We designed 9 analogues in ChemBioOffice 2010 and minimized using the LigPrep tool of Schrödinger 2011. These analogues can obstruct the activity of other signalling pathways which are implicated in many tumors. Results of the QikProp showed that all the analogues lied in the specified range of all the pharmacokinetic (ADMET) properties required to become the successful drug. Docking study was performed to test its anticancer activity against the biomarkers of the five main types of cancers i.e. bone, brain, breast, colon and skin cancer. Grid was generated for each oncoproteins by specifying the active site amino acids. The binding model of best scoring analogue with each protein was assessed from their G-scores and disclosed by docking analysis using the XP visualizer tool. An analysis of the receptor-ligand interaction studies revealed that these nine Darunavir analogues are active against all cancer biomarkers and have the features to prove themselves as anticancer drugs, further to be synthesized and tested against the cell lines. Biomedical Informatics 2014-04-23 /pmc/articles/PMC4070053/ /pubmed/24966524 http://dx.doi.org/10.6026/97320630010221 Text en © 2014 Biomedical Informatics This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Mahto, Manoj kumar
Yellapu, Nanda Kumar
Kilaru, Ravendra Babu
Chamarthi, Naga Raju
Bhaskar, Matcha
Molecular designing and in silico evaluation of darunavir derivatives as anticancer agents
title Molecular designing and in silico evaluation of darunavir derivatives as anticancer agents
title_full Molecular designing and in silico evaluation of darunavir derivatives as anticancer agents
title_fullStr Molecular designing and in silico evaluation of darunavir derivatives as anticancer agents
title_full_unstemmed Molecular designing and in silico evaluation of darunavir derivatives as anticancer agents
title_short Molecular designing and in silico evaluation of darunavir derivatives as anticancer agents
title_sort molecular designing and in silico evaluation of darunavir derivatives as anticancer agents
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4070053/
https://www.ncbi.nlm.nih.gov/pubmed/24966524
http://dx.doi.org/10.6026/97320630010221
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