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BioC interoperability track overview
BioC is a new simple XML format for sharing biomedical text and annotations and libraries to read and write that format. This promotes the development of interoperable tools for natural language processing (NLP) of biomedical text. The interoperability track at the BioCreative IV workshop featured c...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4074764/ https://www.ncbi.nlm.nih.gov/pubmed/24980129 http://dx.doi.org/10.1093/database/bau053 |
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author | Comeau, Donald C. Batista-Navarro, Riza Theresa Dai, Hong-Jie Islamaj Doğan, Rezarta Jimeno Yepes, Antonio Khare, Ritu Lu, Zhiyong Marques, Hernani Mattingly, Carolyn J. Neves, Mariana Peng, Yifan Rak, Rafal Rinaldi, Fabio Tsai, Richard Tzong-Han Verspoor, Karin Wiegers, Thomas C. Wu, Cathy H. Wilbur, W. John |
author_facet | Comeau, Donald C. Batista-Navarro, Riza Theresa Dai, Hong-Jie Islamaj Doğan, Rezarta Jimeno Yepes, Antonio Khare, Ritu Lu, Zhiyong Marques, Hernani Mattingly, Carolyn J. Neves, Mariana Peng, Yifan Rak, Rafal Rinaldi, Fabio Tsai, Richard Tzong-Han Verspoor, Karin Wiegers, Thomas C. Wu, Cathy H. Wilbur, W. John |
author_sort | Comeau, Donald C. |
collection | PubMed |
description | BioC is a new simple XML format for sharing biomedical text and annotations and libraries to read and write that format. This promotes the development of interoperable tools for natural language processing (NLP) of biomedical text. The interoperability track at the BioCreative IV workshop featured contributions using or highlighting the BioC format. These contributions included additional implementations of BioC, many new corpora in the format, biomedical NLP tools consuming and producing the format and online services using the format. The ease of use, broad support and rapidly growing number of tools demonstrate the need for and value of the BioC format. Database URL: http://bioc.sourceforge.net/ |
format | Online Article Text |
id | pubmed-4074764 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-40747642014-07-01 BioC interoperability track overview Comeau, Donald C. Batista-Navarro, Riza Theresa Dai, Hong-Jie Islamaj Doğan, Rezarta Jimeno Yepes, Antonio Khare, Ritu Lu, Zhiyong Marques, Hernani Mattingly, Carolyn J. Neves, Mariana Peng, Yifan Rak, Rafal Rinaldi, Fabio Tsai, Richard Tzong-Han Verspoor, Karin Wiegers, Thomas C. Wu, Cathy H. Wilbur, W. John Database (Oxford) Original Article BioC is a new simple XML format for sharing biomedical text and annotations and libraries to read and write that format. This promotes the development of interoperable tools for natural language processing (NLP) of biomedical text. The interoperability track at the BioCreative IV workshop featured contributions using or highlighting the BioC format. These contributions included additional implementations of BioC, many new corpora in the format, biomedical NLP tools consuming and producing the format and online services using the format. The ease of use, broad support and rapidly growing number of tools demonstrate the need for and value of the BioC format. Database URL: http://bioc.sourceforge.net/ Oxford University Press 2014-06-28 /pmc/articles/PMC4074764/ /pubmed/24980129 http://dx.doi.org/10.1093/database/bau053 Text en Published by Oxford University 2014. This work is written by US Government employees and is in the public domain in the US. |
spellingShingle | Original Article Comeau, Donald C. Batista-Navarro, Riza Theresa Dai, Hong-Jie Islamaj Doğan, Rezarta Jimeno Yepes, Antonio Khare, Ritu Lu, Zhiyong Marques, Hernani Mattingly, Carolyn J. Neves, Mariana Peng, Yifan Rak, Rafal Rinaldi, Fabio Tsai, Richard Tzong-Han Verspoor, Karin Wiegers, Thomas C. Wu, Cathy H. Wilbur, W. John BioC interoperability track overview |
title | BioC interoperability track overview |
title_full | BioC interoperability track overview |
title_fullStr | BioC interoperability track overview |
title_full_unstemmed | BioC interoperability track overview |
title_short | BioC interoperability track overview |
title_sort | bioc interoperability track overview |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4074764/ https://www.ncbi.nlm.nih.gov/pubmed/24980129 http://dx.doi.org/10.1093/database/bau053 |
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