Cargando…

Massive Gene Transfer and Extensive RNA Editing of a Symbiotic Dinoflagellate Plastid Genome

Genome sequencing of Symbiodinium minutum revealed that 95 of 109 plastid-associated genes have been transferred to the nuclear genome and subsequently expanded by gene duplication. Only 14 genes remain in plastids and occur as DNA minicircles. Each minicircle (1.8–3.3 kb) contains one gene and a co...

Descripción completa

Detalles Bibliográficos
Autores principales:	Mungpakdee, Sutada, Shinzato, Chuya, Takeuchi, Takeshi, Kawashima, Takeshi, Koyanagi, Ryo, Hisata, Kanako, Tanaka, Makiko, Goto, Hiroki, Fujie, Manabu, Lin, Senjie, Satoh, Nori, Shoguchi, Eiichi
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2014
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4079212/ https://www.ncbi.nlm.nih.gov/pubmed/24881086 http://dx.doi.org/10.1093/gbe/evu109

Ejemplares similares

The Large Mitochondrial Genome of Symbiodinium minutum Reveals Conserved Noncoding Sequences between Dinoflagellates and Apicomplexans
por: Shoguchi, Eiichi, et al.
Publicado: (2015)

A genomic approach to coral-dinoflagellate symbiosis: studies of Acropora digitifera and Symbiodinium minutum
por: Shinzato, Chuya, et al.
Publicado: (2014)

A New Dinoflagellate Genome Illuminates a Conserved Gene Cluster Involved in Sunscreen Biosynthesis
por: Shoguchi, Eiichi, et al.
Publicado: (2020)

Multifunctional polyketide synthase genes identified by genomic survey of the symbiotic dinoflagellate, Symbiodinium minutum
por: Beedessee, Girish, et al.
Publicado: (2015)

Diversified secondary metabolite biosynthesis gene repertoire revealed in symbiotic dinoflagellates
por: Beedessee, Girish, et al.
Publicado: (2019)

Probing a Coral Genome for Components of the Photoprotective Scytonemin Biosynthetic Pathway and the 2-Aminoethylphosphonate Pathway
por: Shoguchi, Eiichi, et al.
Publicado: (2013)

Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes
por: Shoguchi, Eiichi, et al.
Publicado: (2018)

Expansion and Diversification of Fluorescent Protein Genes in Fifteen Acropora Species during the Evolution of Acroporid Corals
por: Kashimoto, Rio, et al.
Publicado: (2021)

Genome-wide SNP analysis explains coral diversity and recovery in the Ryukyu Archipelago
por: Shinzato, Chuya, et al.
Publicado: (2015)

Correlation between Organelle Genetic Variation and RNA Editing in Dinoflagellates Associated with the Coral Acropora digitifera
por: Shoguchi, Eiichi, et al.
Publicado: (2020)

A draft genome of the brown alga, Cladosiphon okamuranus, S-strain: a platform for future studies of ‘mozuku’ biology
por: Nishitsuji, Koki, et al.
Publicado: (2016)

A siphonous macroalgal genome suggests convergent functions of homeobox genes in algae and land plants
por: Arimoto, Asuka, et al.
Publicado: (2019)

Draft Genome of the Pearl Oyster Pinctada fucata: A Platform for Understanding Bivalve Biology
por: Takeuchi, Takeshi, et al.
Publicado: (2012)

Integrated omics unveil the secondary metabolic landscape of a basal dinoflagellate
por: Beedessee, Girish, et al.
Publicado: (2020)

Comparative genomics of four strains of the edible brown alga, Cladosiphon okamuranus
por: Nishitsuji, Koki, et al.
Publicado: (2020)

Diversification of the Light-Harvesting Complex Gene Family via Intra- and Intergenic Duplications in the Coral Symbiotic Alga Symbiodinium
por: Maruyama, Shinichiro, et al.
Publicado: (2015)

Genome and transcriptome assemblies of the kuruma shrimp, Marsupenaeus japonicus
por: Kawato, Satoshi, et al.
Publicado: (2021)

Multiple I-Type Lysozymes in the Hydrothermal Vent Mussel Bathymodiolus azoricus and Their Role in Symbiotic Plasticity
por: Detree, Camille, et al.
Publicado: (2016)

An environmental DNA metabarcoding survey reveals generic-level occurrence of scleractinian corals at reef slopes of Okinawa Island
por: Nishitsuji, Koki, et al.
Publicado: (2023)

A draft genome of the striped catfish, Pangasianodon hypophthalmus, for comparative analysis of genes relevant to development and a resource for aquaculture improvement
por: Kim, Oanh T. P., et al.
Publicado: (2018)

Whole-Genome Transcriptome Analyses of Native Symbionts Reveal Host Coral Genomic Novelties for Establishing Coral–Algae Symbioses
por: Yoshioka, Yuki, et al.
Publicado: (2020)

Gene clusters for biosynthesis of mycosporine‐like amino acids in dinoflagellate nuclear genomes: Possible recent horizontal gene transfer between species of Symbiodiniaceae (Dinophyceae)
por: Shoguchi, Eiichi
Publicado: (2021)

Response of Coral Reef Dinoflagellates to Nanoplastics under Experimental Conditions Suggests Downregulation of Cellular Metabolism
por: Ripken, Christina, et al.
Publicado: (2020)

Cell surface carbohydrates of symbiotic dinoflagellates and their role in the establishment of cnidarian–dinoflagellate symbiosis
por: Tortorelli, Giada, et al.
Publicado: (2021)

Genome Fragmentation Is Not Confined to the Peridinin Plastid in Dinoflagellates
por: Espelund, Mari, et al.
Publicado: (2012)

Genome Evolution of a Tertiary Dinoflagellate Plastid
por: Gabrielsen, Tove M., et al.
Publicado: (2011)

A Snapshot of a Coral “Holobiont”: A Transcriptome Assembly of the Scleractinian Coral, Porites, Captures a Wide Variety of Genes from Both the Host and Symbiotic Zooxanthellae
por: Shinzato, Chuya, et al.
Publicado: (2014)

Stepwise Evolution of Coral Biomineralization Revealed with Genome-Wide Proteomics and Transcriptomics
por: Takeuchi, Takeshi, et al.
Publicado: (2016)

Active Expression of Genes for Protein Modification Enzymes in Habu Venom Glands
por: Isomoto, Akiko, et al.
Publicado: (2022)

Publisher Correction: Medusozoan genomes inform the evolution of the jellyfish body plan
por: Khalturin, Konstantin, et al.
Publicado: (2019)

Rampant polyuridylylation of plastid gene transcripts in the dinoflagellate Lingulodinium
por: Wang, Yunling, et al.
Publicado: (2006)

Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle
por: Takeuchi, Takeshi, et al.
Publicado: (2016)

New-old hemoglobin-like proteins of symbiotic dinoflagellates
por: Rosic, Nedeljka N, et al.
Publicado: (2013)

The habu genome reveals accelerated evolution of venom protein genes
por: Shibata, Hiroki, et al.
Publicado: (2018)

Active viral infection during blooms of a dinoflagellate indicates dinoflagellate-viral co-adaptation
por: Wang, Jingtian, et al.
Publicado: (2023)

Retrieval of Missing Spliced Leader in Dinoflagellates
por: Zhang, Huan, et al.
Publicado: (2009)

Plastid Genome-Based Phylogeny Pinpointed the Origin of the Green-Colored Plastid in the Dinoflagellate Lepidodinium chlorophorum
por: Kamikawa, Ryoma, et al.
Publicado: (2015)

Color morphs of the coral, Acropora tenuis, show different responses to environmental stress and different expression profiles of fluorescent-protein genes
por: Satoh, Noriyuki, et al.
Publicado: (2021)

Cross-Species, Amplifiable Microsatellite Markers for Neoverrucid Barnacles from Deep-Sea Hydrothermal Vents Developed Using Next-Generation Sequencing
por: Nakajima, Yuichi, et al.
Publicado: (2014)

Divergent northern and southern populations and demographic history of the pearl oyster in the western Pacific revealed with genomic SNPs
por: Takeuchi, Takeshi, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_ufth006ulto6hh4opiish4ceju