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The impact of natural transformation on adaptation in spatially structured bacterial populations

BACKGROUND: Recent studies have demonstrated that natural transformation and the formation of highly structured populations in bacteria are interconnected. In spite of growing evidence about this connection, little is known about the dynamics of natural transformation in spatially structured bacteri...

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Detalles Bibliográficos
Autores principales: Moradigaravand, Danesh, Engelstädter, Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4080760/
https://www.ncbi.nlm.nih.gov/pubmed/24951188
http://dx.doi.org/10.1186/1471-2148-14-141
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author Moradigaravand, Danesh
Engelstädter, Jan
author_facet Moradigaravand, Danesh
Engelstädter, Jan
author_sort Moradigaravand, Danesh
collection PubMed
description BACKGROUND: Recent studies have demonstrated that natural transformation and the formation of highly structured populations in bacteria are interconnected. In spite of growing evidence about this connection, little is known about the dynamics of natural transformation in spatially structured bacterial populations. RESULTS: In this work, we model the interdependency between the dynamics of the bacterial gene pool and those of environmental DNA in space to dissect the effect of transformation on adaptation. Our model reveals that even with only a single locus under consideration, transformation with a free DNA fragment pool results in complex adaptation dynamics that do not emerge in previous models focusing only on the gene shuffling effect of transformation at multiple loci. We demonstrate how spatial restriction on population growth and DNA diffusion in the environment affect the impact of transformation on adaptation. We found that in structured bacterial populations intermediate DNA diffusion rates predominantly cause transformation to impede adaptation by spreading deleterious alleles in the population. CONCLUSION: Overall, our model highlights distinctive evolutionary consequences of bacterial transformation in spatially restricted compared to planktonic bacterial populations.
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spelling pubmed-40807602014-07-18 The impact of natural transformation on adaptation in spatially structured bacterial populations Moradigaravand, Danesh Engelstädter, Jan BMC Evol Biol Research Article BACKGROUND: Recent studies have demonstrated that natural transformation and the formation of highly structured populations in bacteria are interconnected. In spite of growing evidence about this connection, little is known about the dynamics of natural transformation in spatially structured bacterial populations. RESULTS: In this work, we model the interdependency between the dynamics of the bacterial gene pool and those of environmental DNA in space to dissect the effect of transformation on adaptation. Our model reveals that even with only a single locus under consideration, transformation with a free DNA fragment pool results in complex adaptation dynamics that do not emerge in previous models focusing only on the gene shuffling effect of transformation at multiple loci. We demonstrate how spatial restriction on population growth and DNA diffusion in the environment affect the impact of transformation on adaptation. We found that in structured bacterial populations intermediate DNA diffusion rates predominantly cause transformation to impede adaptation by spreading deleterious alleles in the population. CONCLUSION: Overall, our model highlights distinctive evolutionary consequences of bacterial transformation in spatially restricted compared to planktonic bacterial populations. BioMed Central 2014-06-20 /pmc/articles/PMC4080760/ /pubmed/24951188 http://dx.doi.org/10.1186/1471-2148-14-141 Text en Copyright © 2014 Moradigaravand and Engelstädter; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Moradigaravand, Danesh
Engelstädter, Jan
The impact of natural transformation on adaptation in spatially structured bacterial populations
title The impact of natural transformation on adaptation in spatially structured bacterial populations
title_full The impact of natural transformation on adaptation in spatially structured bacterial populations
title_fullStr The impact of natural transformation on adaptation in spatially structured bacterial populations
title_full_unstemmed The impact of natural transformation on adaptation in spatially structured bacterial populations
title_short The impact of natural transformation on adaptation in spatially structured bacterial populations
title_sort impact of natural transformation on adaptation in spatially structured bacterial populations
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4080760/
https://www.ncbi.nlm.nih.gov/pubmed/24951188
http://dx.doi.org/10.1186/1471-2148-14-141
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