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The impact of natural transformation on adaptation in spatially structured bacterial populations
BACKGROUND: Recent studies have demonstrated that natural transformation and the formation of highly structured populations in bacteria are interconnected. In spite of growing evidence about this connection, little is known about the dynamics of natural transformation in spatially structured bacteri...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4080760/ https://www.ncbi.nlm.nih.gov/pubmed/24951188 http://dx.doi.org/10.1186/1471-2148-14-141 |
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author | Moradigaravand, Danesh Engelstädter, Jan |
author_facet | Moradigaravand, Danesh Engelstädter, Jan |
author_sort | Moradigaravand, Danesh |
collection | PubMed |
description | BACKGROUND: Recent studies have demonstrated that natural transformation and the formation of highly structured populations in bacteria are interconnected. In spite of growing evidence about this connection, little is known about the dynamics of natural transformation in spatially structured bacterial populations. RESULTS: In this work, we model the interdependency between the dynamics of the bacterial gene pool and those of environmental DNA in space to dissect the effect of transformation on adaptation. Our model reveals that even with only a single locus under consideration, transformation with a free DNA fragment pool results in complex adaptation dynamics that do not emerge in previous models focusing only on the gene shuffling effect of transformation at multiple loci. We demonstrate how spatial restriction on population growth and DNA diffusion in the environment affect the impact of transformation on adaptation. We found that in structured bacterial populations intermediate DNA diffusion rates predominantly cause transformation to impede adaptation by spreading deleterious alleles in the population. CONCLUSION: Overall, our model highlights distinctive evolutionary consequences of bacterial transformation in spatially restricted compared to planktonic bacterial populations. |
format | Online Article Text |
id | pubmed-4080760 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-40807602014-07-18 The impact of natural transformation on adaptation in spatially structured bacterial populations Moradigaravand, Danesh Engelstädter, Jan BMC Evol Biol Research Article BACKGROUND: Recent studies have demonstrated that natural transformation and the formation of highly structured populations in bacteria are interconnected. In spite of growing evidence about this connection, little is known about the dynamics of natural transformation in spatially structured bacterial populations. RESULTS: In this work, we model the interdependency between the dynamics of the bacterial gene pool and those of environmental DNA in space to dissect the effect of transformation on adaptation. Our model reveals that even with only a single locus under consideration, transformation with a free DNA fragment pool results in complex adaptation dynamics that do not emerge in previous models focusing only on the gene shuffling effect of transformation at multiple loci. We demonstrate how spatial restriction on population growth and DNA diffusion in the environment affect the impact of transformation on adaptation. We found that in structured bacterial populations intermediate DNA diffusion rates predominantly cause transformation to impede adaptation by spreading deleterious alleles in the population. CONCLUSION: Overall, our model highlights distinctive evolutionary consequences of bacterial transformation in spatially restricted compared to planktonic bacterial populations. BioMed Central 2014-06-20 /pmc/articles/PMC4080760/ /pubmed/24951188 http://dx.doi.org/10.1186/1471-2148-14-141 Text en Copyright © 2014 Moradigaravand and Engelstädter; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/4.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Moradigaravand, Danesh Engelstädter, Jan The impact of natural transformation on adaptation in spatially structured bacterial populations |
title | The impact of natural transformation on adaptation in spatially structured bacterial populations |
title_full | The impact of natural transformation on adaptation in spatially structured bacterial populations |
title_fullStr | The impact of natural transformation on adaptation in spatially structured bacterial populations |
title_full_unstemmed | The impact of natural transformation on adaptation in spatially structured bacterial populations |
title_short | The impact of natural transformation on adaptation in spatially structured bacterial populations |
title_sort | impact of natural transformation on adaptation in spatially structured bacterial populations |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4080760/ https://www.ncbi.nlm.nih.gov/pubmed/24951188 http://dx.doi.org/10.1186/1471-2148-14-141 |
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