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Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil
Five novel strains of Photobacterium (A-394T, A-373, A-379, A-397 and A-398) were isolated from bleached coral Madracis decactis (scleractinian) in the remote St Peter & St Archipelago (SPSPA), Mid-Atlantic Ridge, Brazil. Healthy M. decactis specimens were also surveyed, but no strains were rela...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4081156/ https://www.ncbi.nlm.nih.gov/pubmed/25024905 http://dx.doi.org/10.7717/peerj.427 |
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author | Moreira, Ana Paula B. Duytschaever, Gwen Chimetto Tonon, Luciane A. Fróes, Adriana M. de Oliveira, Louisi S. Amado-Filho, Gilberto M. Francini-Filho, Ronaldo B. De Vos, Paul Swings, Jean Thompson, Cristiane C. Thompson, Fabiano L. |
author_facet | Moreira, Ana Paula B. Duytschaever, Gwen Chimetto Tonon, Luciane A. Fróes, Adriana M. de Oliveira, Louisi S. Amado-Filho, Gilberto M. Francini-Filho, Ronaldo B. De Vos, Paul Swings, Jean Thompson, Cristiane C. Thompson, Fabiano L. |
author_sort | Moreira, Ana Paula B. |
collection | PubMed |
description | Five novel strains of Photobacterium (A-394T, A-373, A-379, A-397 and A-398) were isolated from bleached coral Madracis decactis (scleractinian) in the remote St Peter & St Archipelago (SPSPA), Mid-Atlantic Ridge, Brazil. Healthy M. decactis specimens were also surveyed, but no strains were related to them. The novel isolates formed a distinct lineage based on the 16S rRNA, recA, and rpoA gene sequences analysis. Their closest phylogenetic neighbours were Photobacterium rosenbergii, P. gaetbulicola, and P. lutimaris, sharing 96.6 to 95.8% 16S rRNA gene sequence similarity. The novel species can be differentiated from the closest neighbours by several phenotypic and chemotaxonomic markers. It grows at pH 11, produces tryptophane deaminase, presents the fatty acid C(18:0), but lacks C(16:0) iso. The whole cell protein profile, based in MALDI-TOF MS, distinguished the strains of the novel species among each other and from the closest neighbors. In addition, we are releasing the whole genome sequence of the type strain. The name Photobacterium sanctipauli sp. nov. is proposed for this taxon. The G + C content of the type strain A-394(T) (= LMG27910(T) = CAIM1892(T)) is 48.2 mol%. |
format | Online Article Text |
id | pubmed-4081156 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-40811562014-07-14 Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil Moreira, Ana Paula B. Duytschaever, Gwen Chimetto Tonon, Luciane A. Fróes, Adriana M. de Oliveira, Louisi S. Amado-Filho, Gilberto M. Francini-Filho, Ronaldo B. De Vos, Paul Swings, Jean Thompson, Cristiane C. Thompson, Fabiano L. PeerJ Biodiversity Five novel strains of Photobacterium (A-394T, A-373, A-379, A-397 and A-398) were isolated from bleached coral Madracis decactis (scleractinian) in the remote St Peter & St Archipelago (SPSPA), Mid-Atlantic Ridge, Brazil. Healthy M. decactis specimens were also surveyed, but no strains were related to them. The novel isolates formed a distinct lineage based on the 16S rRNA, recA, and rpoA gene sequences analysis. Their closest phylogenetic neighbours were Photobacterium rosenbergii, P. gaetbulicola, and P. lutimaris, sharing 96.6 to 95.8% 16S rRNA gene sequence similarity. The novel species can be differentiated from the closest neighbours by several phenotypic and chemotaxonomic markers. It grows at pH 11, produces tryptophane deaminase, presents the fatty acid C(18:0), but lacks C(16:0) iso. The whole cell protein profile, based in MALDI-TOF MS, distinguished the strains of the novel species among each other and from the closest neighbors. In addition, we are releasing the whole genome sequence of the type strain. The name Photobacterium sanctipauli sp. nov. is proposed for this taxon. The G + C content of the type strain A-394(T) (= LMG27910(T) = CAIM1892(T)) is 48.2 mol%. PeerJ Inc. 2014-06-19 /pmc/articles/PMC4081156/ /pubmed/25024905 http://dx.doi.org/10.7717/peerj.427 Text en © 2014 Moreira et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Biodiversity Moreira, Ana Paula B. Duytschaever, Gwen Chimetto Tonon, Luciane A. Fróes, Adriana M. de Oliveira, Louisi S. Amado-Filho, Gilberto M. Francini-Filho, Ronaldo B. De Vos, Paul Swings, Jean Thompson, Cristiane C. Thompson, Fabiano L. Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil |
title | Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil |
title_full | Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil |
title_fullStr | Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil |
title_full_unstemmed | Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil |
title_short | Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil |
title_sort | photobacterium sanctipauli sp. nov. isolated from bleached madracis decactis (scleractinia) in the st peter & st paul archipelago, mid-atlantic ridge, brazil |
topic | Biodiversity |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4081156/ https://www.ncbi.nlm.nih.gov/pubmed/25024905 http://dx.doi.org/10.7717/peerj.427 |
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