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Performance of distributed multiscale simulations
Multiscale simulations model phenomena across natural scales using monolithic or component-based code, running on local or distributed resources. In this work, we investigate the performance of distributed multiscale computing of component-based models, guided by six multiscale applications with dif...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society Publishing
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4084531/ https://www.ncbi.nlm.nih.gov/pubmed/24982258 http://dx.doi.org/10.1098/rsta.2013.0407 |
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author | Borgdorff, J. Ben Belgacem, M. Bona-Casas, C. Fazendeiro, L. Groen, D. Hoenen, O. Mizeranschi, A. Suter, J. L. Coster, D. Coveney, P. V. Dubitzky, W. Hoekstra, A. G. Strand, P. Chopard, B. |
author_facet | Borgdorff, J. Ben Belgacem, M. Bona-Casas, C. Fazendeiro, L. Groen, D. Hoenen, O. Mizeranschi, A. Suter, J. L. Coster, D. Coveney, P. V. Dubitzky, W. Hoekstra, A. G. Strand, P. Chopard, B. |
author_sort | Borgdorff, J. |
collection | PubMed |
description | Multiscale simulations model phenomena across natural scales using monolithic or component-based code, running on local or distributed resources. In this work, we investigate the performance of distributed multiscale computing of component-based models, guided by six multiscale applications with different characteristics and from several disciplines. Three modes of distributed multiscale computing are identified: supplementing local dependencies with large-scale resources, load distribution over multiple resources, and load balancing of small- and large-scale resources. We find that the first mode has the apparent benefit of increasing simulation speed, and the second mode can increase simulation speed if local resources are limited. Depending on resource reservation and model coupling topology, the third mode may result in a reduction of resource consumption. |
format | Online Article Text |
id | pubmed-4084531 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | The Royal Society Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-40845312014-08-06 Performance of distributed multiscale simulations Borgdorff, J. Ben Belgacem, M. Bona-Casas, C. Fazendeiro, L. Groen, D. Hoenen, O. Mizeranschi, A. Suter, J. L. Coster, D. Coveney, P. V. Dubitzky, W. Hoekstra, A. G. Strand, P. Chopard, B. Philos Trans A Math Phys Eng Sci Articles Multiscale simulations model phenomena across natural scales using monolithic or component-based code, running on local or distributed resources. In this work, we investigate the performance of distributed multiscale computing of component-based models, guided by six multiscale applications with different characteristics and from several disciplines. Three modes of distributed multiscale computing are identified: supplementing local dependencies with large-scale resources, load distribution over multiple resources, and load balancing of small- and large-scale resources. We find that the first mode has the apparent benefit of increasing simulation speed, and the second mode can increase simulation speed if local resources are limited. Depending on resource reservation and model coupling topology, the third mode may result in a reduction of resource consumption. The Royal Society Publishing 2014-08-06 /pmc/articles/PMC4084531/ /pubmed/24982258 http://dx.doi.org/10.1098/rsta.2013.0407 Text en http://creativecommons.org/licenses/by/3.0/ © 2014 The Authors. Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/3.0/, which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Articles Borgdorff, J. Ben Belgacem, M. Bona-Casas, C. Fazendeiro, L. Groen, D. Hoenen, O. Mizeranschi, A. Suter, J. L. Coster, D. Coveney, P. V. Dubitzky, W. Hoekstra, A. G. Strand, P. Chopard, B. Performance of distributed multiscale simulations |
title | Performance of distributed multiscale simulations |
title_full | Performance of distributed multiscale simulations |
title_fullStr | Performance of distributed multiscale simulations |
title_full_unstemmed | Performance of distributed multiscale simulations |
title_short | Performance of distributed multiscale simulations |
title_sort | performance of distributed multiscale simulations |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4084531/ https://www.ncbi.nlm.nih.gov/pubmed/24982258 http://dx.doi.org/10.1098/rsta.2013.0407 |
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