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A Comparison of Loop-Mediated Isothermal Amplification (LAMP) with Other Surveillance Tools for Echinococcus granulosus Diagnosis in Canine Definitive Hosts
BACKGROUND: Cystic echinococcosis is highly prevalent in northwest China. A cost-effective, easy to operate diagnostic tool with high sensitivity and specificity would greatly facilitate the monitoring of Echinococcus infections in canine definitive hosts. METHODS: The primers used in the LAMP assay...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4089910/ https://www.ncbi.nlm.nih.gov/pubmed/25007051 http://dx.doi.org/10.1371/journal.pone.0100877 |
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author | Ni, Xing-Wei McManus, Donald P. Lou, Zhong-Zi Yang, Ji-Fei Yan, Hong-Bin Li, Li Li, Hong-Min Liu, Quan-Yuan Li, Chun-Hua Shi, Wan-Gui Fan, Yan-Lei Liu, Xu Cai, Jin-Zhong Lei, Meng-Tong Fu, Bao-Quan Yang, Yu-Rong Jia, Wan-Zhong |
author_facet | Ni, Xing-Wei McManus, Donald P. Lou, Zhong-Zi Yang, Ji-Fei Yan, Hong-Bin Li, Li Li, Hong-Min Liu, Quan-Yuan Li, Chun-Hua Shi, Wan-Gui Fan, Yan-Lei Liu, Xu Cai, Jin-Zhong Lei, Meng-Tong Fu, Bao-Quan Yang, Yu-Rong Jia, Wan-Zhong |
author_sort | Ni, Xing-Wei |
collection | PubMed |
description | BACKGROUND: Cystic echinococcosis is highly prevalent in northwest China. A cost-effective, easy to operate diagnostic tool with high sensitivity and specificity would greatly facilitate the monitoring of Echinococcus infections in canine definitive hosts. METHODS: The primers used in the LAMP assay were based on the mitochondrial nad5 gene of E. granulosus sensu stricto (E. granulosus s.s., or E.g.s.s.) and were designed using Primer Explorer V4 software. The developed LAMP assay was compared with a conventional PCR method, copro-ELISA and microscopy, using the faeces of dogs experimentally infected with E.g.s.s., and field-collected faeces of domestic dogs including 190 from Qinghai province highly endemic for E.g.s.s. and 30 controls from an area in Gansu, where a domestic dog de-worming program was in operation. RESULTS: The positivity rates obtained for the field-collected faecal samples were 12.6%, 1.6% and 2.1% by the LAMP, PCR and copro-ELISA assays, respectively. All samples obtained from the control dogs were negative. Compared with the conventional PCR, the LAMP assay provided 88.8% specificity and 100% sensitivity. The higher sensitivity of the LAMP method was also shown by the fact that it could detect the presence of laboratory challenge dog infections of E. granulsous s.s. four days earlier than the PCR method. Three copro-samples shown positive by the commercial copro-ELISA were all negative by LAMP, PCR and microscopy, which suggests these samples may have originated from another infection rather than E. granulsous s.s., possibly E. shiquicus or E. Canadensis, which is also present in China. CONCLUSIONS: We have developed a potentially useful surveillance tool for determining the prevalence of canine E. granulosus s.s. infections in the field. The LAMP assay may lead to a more cost-effective and practicable way of tracking Echinococcus infections in canids, especially when combined with the copro-ELISA. |
format | Online Article Text |
id | pubmed-4089910 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-40899102014-07-14 A Comparison of Loop-Mediated Isothermal Amplification (LAMP) with Other Surveillance Tools for Echinococcus granulosus Diagnosis in Canine Definitive Hosts Ni, Xing-Wei McManus, Donald P. Lou, Zhong-Zi Yang, Ji-Fei Yan, Hong-Bin Li, Li Li, Hong-Min Liu, Quan-Yuan Li, Chun-Hua Shi, Wan-Gui Fan, Yan-Lei Liu, Xu Cai, Jin-Zhong Lei, Meng-Tong Fu, Bao-Quan Yang, Yu-Rong Jia, Wan-Zhong PLoS One Research Article BACKGROUND: Cystic echinococcosis is highly prevalent in northwest China. A cost-effective, easy to operate diagnostic tool with high sensitivity and specificity would greatly facilitate the monitoring of Echinococcus infections in canine definitive hosts. METHODS: The primers used in the LAMP assay were based on the mitochondrial nad5 gene of E. granulosus sensu stricto (E. granulosus s.s., or E.g.s.s.) and were designed using Primer Explorer V4 software. The developed LAMP assay was compared with a conventional PCR method, copro-ELISA and microscopy, using the faeces of dogs experimentally infected with E.g.s.s., and field-collected faeces of domestic dogs including 190 from Qinghai province highly endemic for E.g.s.s. and 30 controls from an area in Gansu, where a domestic dog de-worming program was in operation. RESULTS: The positivity rates obtained for the field-collected faecal samples were 12.6%, 1.6% and 2.1% by the LAMP, PCR and copro-ELISA assays, respectively. All samples obtained from the control dogs were negative. Compared with the conventional PCR, the LAMP assay provided 88.8% specificity and 100% sensitivity. The higher sensitivity of the LAMP method was also shown by the fact that it could detect the presence of laboratory challenge dog infections of E. granulsous s.s. four days earlier than the PCR method. Three copro-samples shown positive by the commercial copro-ELISA were all negative by LAMP, PCR and microscopy, which suggests these samples may have originated from another infection rather than E. granulsous s.s., possibly E. shiquicus or E. Canadensis, which is also present in China. CONCLUSIONS: We have developed a potentially useful surveillance tool for determining the prevalence of canine E. granulosus s.s. infections in the field. The LAMP assay may lead to a more cost-effective and practicable way of tracking Echinococcus infections in canids, especially when combined with the copro-ELISA. Public Library of Science 2014-07-09 /pmc/articles/PMC4089910/ /pubmed/25007051 http://dx.doi.org/10.1371/journal.pone.0100877 Text en © 2014 Ni et al http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Ni, Xing-Wei McManus, Donald P. Lou, Zhong-Zi Yang, Ji-Fei Yan, Hong-Bin Li, Li Li, Hong-Min Liu, Quan-Yuan Li, Chun-Hua Shi, Wan-Gui Fan, Yan-Lei Liu, Xu Cai, Jin-Zhong Lei, Meng-Tong Fu, Bao-Quan Yang, Yu-Rong Jia, Wan-Zhong A Comparison of Loop-Mediated Isothermal Amplification (LAMP) with Other Surveillance Tools for Echinococcus granulosus Diagnosis in Canine Definitive Hosts |
title | A Comparison of Loop-Mediated Isothermal Amplification (LAMP) with Other Surveillance Tools for Echinococcus granulosus Diagnosis in Canine Definitive Hosts |
title_full | A Comparison of Loop-Mediated Isothermal Amplification (LAMP) with Other Surveillance Tools for Echinococcus granulosus Diagnosis in Canine Definitive Hosts |
title_fullStr | A Comparison of Loop-Mediated Isothermal Amplification (LAMP) with Other Surveillance Tools for Echinococcus granulosus Diagnosis in Canine Definitive Hosts |
title_full_unstemmed | A Comparison of Loop-Mediated Isothermal Amplification (LAMP) with Other Surveillance Tools for Echinococcus granulosus Diagnosis in Canine Definitive Hosts |
title_short | A Comparison of Loop-Mediated Isothermal Amplification (LAMP) with Other Surveillance Tools for Echinococcus granulosus Diagnosis in Canine Definitive Hosts |
title_sort | comparison of loop-mediated isothermal amplification (lamp) with other surveillance tools for echinococcus granulosus diagnosis in canine definitive hosts |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4089910/ https://www.ncbi.nlm.nih.gov/pubmed/25007051 http://dx.doi.org/10.1371/journal.pone.0100877 |
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