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An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine
Recently, an important topic of liver tumorigenesis had been published in 2013. In this report, Ras and Rho had defined the relation of liver tumorigenesis. The traditional Chinese medicine (TCM) database has been screened for molecular compounds by simulating molecular docking and molecular dynamic...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090509/ https://www.ncbi.nlm.nih.gov/pubmed/25045674 http://dx.doi.org/10.1155/2014/428210 |
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author | Hung, Tzu-Chieh Lee, Wen-Yuan Chen, Kuen-Bao Chan, Yueh-Chiu Chen, Calvin Yu-Chian |
author_facet | Hung, Tzu-Chieh Lee, Wen-Yuan Chen, Kuen-Bao Chan, Yueh-Chiu Chen, Calvin Yu-Chian |
author_sort | Hung, Tzu-Chieh |
collection | PubMed |
description | Recently, an important topic of liver tumorigenesis had been published in 2013. In this report, Ras and Rho had defined the relation of liver tumorigenesis. The traditional Chinese medicine (TCM) database has been screened for molecular compounds by simulating molecular docking and molecular dynamics to regulate Ras and liver tumorigenesis. Saussureamine C, S-allylmercaptocysteine, and Tryptophan are selected based on the highest docking score than other TCM compounds. The molecular dynamics are helpful in the analysis and detection of protein-ligand interactions. Based on the docking poses, hydrophobic interactions, and hydrogen bond variations, this research surmises are the main regions of important amino acids in Ras. In addition to the detection of TCM compound efficacy, we suggest Saussureamine C is better than the others for protein-ligand interaction. |
format | Online Article Text |
id | pubmed-4090509 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-40905092014-07-20 An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine Hung, Tzu-Chieh Lee, Wen-Yuan Chen, Kuen-Bao Chan, Yueh-Chiu Chen, Calvin Yu-Chian Biomed Res Int Research Article Recently, an important topic of liver tumorigenesis had been published in 2013. In this report, Ras and Rho had defined the relation of liver tumorigenesis. The traditional Chinese medicine (TCM) database has been screened for molecular compounds by simulating molecular docking and molecular dynamics to regulate Ras and liver tumorigenesis. Saussureamine C, S-allylmercaptocysteine, and Tryptophan are selected based on the highest docking score than other TCM compounds. The molecular dynamics are helpful in the analysis and detection of protein-ligand interactions. Based on the docking poses, hydrophobic interactions, and hydrogen bond variations, this research surmises are the main regions of important amino acids in Ras. In addition to the detection of TCM compound efficacy, we suggest Saussureamine C is better than the others for protein-ligand interaction. Hindawi Publishing Corporation 2014 2014-06-19 /pmc/articles/PMC4090509/ /pubmed/25045674 http://dx.doi.org/10.1155/2014/428210 Text en Copyright © 2014 Tzu-Chieh Hung et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Hung, Tzu-Chieh Lee, Wen-Yuan Chen, Kuen-Bao Chan, Yueh-Chiu Chen, Calvin Yu-Chian An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine |
title | An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine |
title_full | An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine |
title_fullStr | An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine |
title_full_unstemmed | An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine |
title_short | An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine |
title_sort | investigation of small gtpases in relation to liver tumorigenesis using traditional chinese medicine |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090509/ https://www.ncbi.nlm.nih.gov/pubmed/25045674 http://dx.doi.org/10.1155/2014/428210 |
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