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An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine

Recently, an important topic of liver tumorigenesis had been published in 2013. In this report, Ras and Rho had defined the relation of liver tumorigenesis. The traditional Chinese medicine (TCM) database has been screened for molecular compounds by simulating molecular docking and molecular dynamic...

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Autores principales: Hung, Tzu-Chieh, Lee, Wen-Yuan, Chen, Kuen-Bao, Chan, Yueh-Chiu, Chen, Calvin Yu-Chian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090509/
https://www.ncbi.nlm.nih.gov/pubmed/25045674
http://dx.doi.org/10.1155/2014/428210
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author Hung, Tzu-Chieh
Lee, Wen-Yuan
Chen, Kuen-Bao
Chan, Yueh-Chiu
Chen, Calvin Yu-Chian
author_facet Hung, Tzu-Chieh
Lee, Wen-Yuan
Chen, Kuen-Bao
Chan, Yueh-Chiu
Chen, Calvin Yu-Chian
author_sort Hung, Tzu-Chieh
collection PubMed
description Recently, an important topic of liver tumorigenesis had been published in 2013. In this report, Ras and Rho had defined the relation of liver tumorigenesis. The traditional Chinese medicine (TCM) database has been screened for molecular compounds by simulating molecular docking and molecular dynamics to regulate Ras and liver tumorigenesis. Saussureamine C, S-allylmercaptocysteine, and Tryptophan are selected based on the highest docking score than other TCM compounds. The molecular dynamics are helpful in the analysis and detection of protein-ligand interactions. Based on the docking poses, hydrophobic interactions, and hydrogen bond variations, this research surmises are the main regions of important amino acids in Ras. In addition to the detection of TCM compound efficacy, we suggest Saussureamine C is better than the others for protein-ligand interaction.
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spelling pubmed-40905092014-07-20 An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine Hung, Tzu-Chieh Lee, Wen-Yuan Chen, Kuen-Bao Chan, Yueh-Chiu Chen, Calvin Yu-Chian Biomed Res Int Research Article Recently, an important topic of liver tumorigenesis had been published in 2013. In this report, Ras and Rho had defined the relation of liver tumorigenesis. The traditional Chinese medicine (TCM) database has been screened for molecular compounds by simulating molecular docking and molecular dynamics to regulate Ras and liver tumorigenesis. Saussureamine C, S-allylmercaptocysteine, and Tryptophan are selected based on the highest docking score than other TCM compounds. The molecular dynamics are helpful in the analysis and detection of protein-ligand interactions. Based on the docking poses, hydrophobic interactions, and hydrogen bond variations, this research surmises are the main regions of important amino acids in Ras. In addition to the detection of TCM compound efficacy, we suggest Saussureamine C is better than the others for protein-ligand interaction. Hindawi Publishing Corporation 2014 2014-06-19 /pmc/articles/PMC4090509/ /pubmed/25045674 http://dx.doi.org/10.1155/2014/428210 Text en Copyright © 2014 Tzu-Chieh Hung et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Hung, Tzu-Chieh
Lee, Wen-Yuan
Chen, Kuen-Bao
Chan, Yueh-Chiu
Chen, Calvin Yu-Chian
An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine
title An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine
title_full An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine
title_fullStr An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine
title_full_unstemmed An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine
title_short An Investigation of Small GTPases in relation to Liver Tumorigenesis Using Traditional Chinese Medicine
title_sort investigation of small gtpases in relation to liver tumorigenesis using traditional chinese medicine
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090509/
https://www.ncbi.nlm.nih.gov/pubmed/25045674
http://dx.doi.org/10.1155/2014/428210
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