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Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis

BACKGROUND: Focal segmental glomerulosclerosis (FSGS) is a type of nephrotic syndrome which is diagnosed by renal biopsy. Degree of the proteinuria, renal dysfunction, histologic findings and the response to therapy are some factors used for evaluating the prognosis of FSGS. OBJECTIVES: In the prese...

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Autores principales: Kalantari, Shiva, Nafar, Mohsen, Samavat, Shiva, Rezaei-Tavirani, Mostafa, Rutishauser, Dorothea, Zubarev, Roman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Kowsar 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090581/
https://www.ncbi.nlm.nih.gov/pubmed/25032130
http://dx.doi.org/10.5812/numonthly.16806
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author Kalantari, Shiva
Nafar, Mohsen
Samavat, Shiva
Rezaei-Tavirani, Mostafa
Rutishauser, Dorothea
Zubarev, Roman
author_facet Kalantari, Shiva
Nafar, Mohsen
Samavat, Shiva
Rezaei-Tavirani, Mostafa
Rutishauser, Dorothea
Zubarev, Roman
author_sort Kalantari, Shiva
collection PubMed
description BACKGROUND: Focal segmental glomerulosclerosis (FSGS) is a type of nephrotic syndrome which is diagnosed by renal biopsy. Degree of the proteinuria, renal dysfunction, histologic findings and the response to therapy are some factors used for evaluating the prognosis of FSGS. OBJECTIVES: In the present study, we attempted to discover some protein candidates for disease prognosis related to glomerular filtration rate (renal dysfunction). PATIENTS AND METHODS: Urine samples were collected from ten patients. Urine proteome was extracted and trypsinated. Digested peptides were separated and identified by nano-flow LC-MS/MS. Protein content were determined using label-free quantification method. Protein profiles were analyzed using supervised multivariate statistical method. RESULTS: Output of a predictive model was 54 significant proteins of which ribonuclease 2 and haptoglobin had the greatest fold change in terms of overrepresentation and underrepresentation in patients with the best and worse prognosis, respectively. Complement and coagulation cascades were the only significant pathways which were impaired in FSGS. CONCLUSIONS: Urinary biomarkers can potentially be used as non-invasive prognostic markers. However these candidate biomarkers need further validation by an alternative method and in a larger cohort.
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spelling pubmed-40905812014-07-16 Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis Kalantari, Shiva Nafar, Mohsen Samavat, Shiva Rezaei-Tavirani, Mostafa Rutishauser, Dorothea Zubarev, Roman Nephrourol Mon Research Article BACKGROUND: Focal segmental glomerulosclerosis (FSGS) is a type of nephrotic syndrome which is diagnosed by renal biopsy. Degree of the proteinuria, renal dysfunction, histologic findings and the response to therapy are some factors used for evaluating the prognosis of FSGS. OBJECTIVES: In the present study, we attempted to discover some protein candidates for disease prognosis related to glomerular filtration rate (renal dysfunction). PATIENTS AND METHODS: Urine samples were collected from ten patients. Urine proteome was extracted and trypsinated. Digested peptides were separated and identified by nano-flow LC-MS/MS. Protein content were determined using label-free quantification method. Protein profiles were analyzed using supervised multivariate statistical method. RESULTS: Output of a predictive model was 54 significant proteins of which ribonuclease 2 and haptoglobin had the greatest fold change in terms of overrepresentation and underrepresentation in patients with the best and worse prognosis, respectively. Complement and coagulation cascades were the only significant pathways which were impaired in FSGS. CONCLUSIONS: Urinary biomarkers can potentially be used as non-invasive prognostic markers. However these candidate biomarkers need further validation by an alternative method and in a larger cohort. Kowsar 2014-03-09 /pmc/articles/PMC4090581/ /pubmed/25032130 http://dx.doi.org/10.5812/numonthly.16806 Text en Copyright © 2014, Nephrology and Urology Research Center; Published by Kowsar Corp. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kalantari, Shiva
Nafar, Mohsen
Samavat, Shiva
Rezaei-Tavirani, Mostafa
Rutishauser, Dorothea
Zubarev, Roman
Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis
title Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis
title_full Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis
title_fullStr Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis
title_full_unstemmed Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis
title_short Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis
title_sort urinary prognostic biomarkers in patients with focal segmental glomerulosclerosis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090581/
https://www.ncbi.nlm.nih.gov/pubmed/25032130
http://dx.doi.org/10.5812/numonthly.16806
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