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Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis
BACKGROUND: Focal segmental glomerulosclerosis (FSGS) is a type of nephrotic syndrome which is diagnosed by renal biopsy. Degree of the proteinuria, renal dysfunction, histologic findings and the response to therapy are some factors used for evaluating the prognosis of FSGS. OBJECTIVES: In the prese...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Kowsar
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090581/ https://www.ncbi.nlm.nih.gov/pubmed/25032130 http://dx.doi.org/10.5812/numonthly.16806 |
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author | Kalantari, Shiva Nafar, Mohsen Samavat, Shiva Rezaei-Tavirani, Mostafa Rutishauser, Dorothea Zubarev, Roman |
author_facet | Kalantari, Shiva Nafar, Mohsen Samavat, Shiva Rezaei-Tavirani, Mostafa Rutishauser, Dorothea Zubarev, Roman |
author_sort | Kalantari, Shiva |
collection | PubMed |
description | BACKGROUND: Focal segmental glomerulosclerosis (FSGS) is a type of nephrotic syndrome which is diagnosed by renal biopsy. Degree of the proteinuria, renal dysfunction, histologic findings and the response to therapy are some factors used for evaluating the prognosis of FSGS. OBJECTIVES: In the present study, we attempted to discover some protein candidates for disease prognosis related to glomerular filtration rate (renal dysfunction). PATIENTS AND METHODS: Urine samples were collected from ten patients. Urine proteome was extracted and trypsinated. Digested peptides were separated and identified by nano-flow LC-MS/MS. Protein content were determined using label-free quantification method. Protein profiles were analyzed using supervised multivariate statistical method. RESULTS: Output of a predictive model was 54 significant proteins of which ribonuclease 2 and haptoglobin had the greatest fold change in terms of overrepresentation and underrepresentation in patients with the best and worse prognosis, respectively. Complement and coagulation cascades were the only significant pathways which were impaired in FSGS. CONCLUSIONS: Urinary biomarkers can potentially be used as non-invasive prognostic markers. However these candidate biomarkers need further validation by an alternative method and in a larger cohort. |
format | Online Article Text |
id | pubmed-4090581 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Kowsar |
record_format | MEDLINE/PubMed |
spelling | pubmed-40905812014-07-16 Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis Kalantari, Shiva Nafar, Mohsen Samavat, Shiva Rezaei-Tavirani, Mostafa Rutishauser, Dorothea Zubarev, Roman Nephrourol Mon Research Article BACKGROUND: Focal segmental glomerulosclerosis (FSGS) is a type of nephrotic syndrome which is diagnosed by renal biopsy. Degree of the proteinuria, renal dysfunction, histologic findings and the response to therapy are some factors used for evaluating the prognosis of FSGS. OBJECTIVES: In the present study, we attempted to discover some protein candidates for disease prognosis related to glomerular filtration rate (renal dysfunction). PATIENTS AND METHODS: Urine samples were collected from ten patients. Urine proteome was extracted and trypsinated. Digested peptides were separated and identified by nano-flow LC-MS/MS. Protein content were determined using label-free quantification method. Protein profiles were analyzed using supervised multivariate statistical method. RESULTS: Output of a predictive model was 54 significant proteins of which ribonuclease 2 and haptoglobin had the greatest fold change in terms of overrepresentation and underrepresentation in patients with the best and worse prognosis, respectively. Complement and coagulation cascades were the only significant pathways which were impaired in FSGS. CONCLUSIONS: Urinary biomarkers can potentially be used as non-invasive prognostic markers. However these candidate biomarkers need further validation by an alternative method and in a larger cohort. Kowsar 2014-03-09 /pmc/articles/PMC4090581/ /pubmed/25032130 http://dx.doi.org/10.5812/numonthly.16806 Text en Copyright © 2014, Nephrology and Urology Research Center; Published by Kowsar Corp. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Kalantari, Shiva Nafar, Mohsen Samavat, Shiva Rezaei-Tavirani, Mostafa Rutishauser, Dorothea Zubarev, Roman Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis |
title | Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis |
title_full | Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis |
title_fullStr | Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis |
title_full_unstemmed | Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis |
title_short | Urinary Prognostic Biomarkers in Patients With Focal Segmental Glomerulosclerosis |
title_sort | urinary prognostic biomarkers in patients with focal segmental glomerulosclerosis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090581/ https://www.ncbi.nlm.nih.gov/pubmed/25032130 http://dx.doi.org/10.5812/numonthly.16806 |
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