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Probing Water Density and Dynamics in the Chaperonin GroEL Cavity
[Image: see text] ATP-dependent binding of the chaperonin GroEL to its cofactor GroES forms a cavity in which encapsulated substrate proteins can fold in isolation from bulk solution. It has been suggested that folding in the cavity may differ from that in bulk solution owing to steric confinement,...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2014
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4091268/ https://www.ncbi.nlm.nih.gov/pubmed/24888581 http://dx.doi.org/10.1021/ja503501x |
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author | Franck, John M. Sokolovski, Miri Kessler, Naama Matalon, Erez Gordon-Grossman, Michal Han, Song-i Goldfarb, Daniella Horovitz, Amnon |
author_facet | Franck, John M. Sokolovski, Miri Kessler, Naama Matalon, Erez Gordon-Grossman, Michal Han, Song-i Goldfarb, Daniella Horovitz, Amnon |
author_sort | Franck, John M. |
collection | PubMed |
description | [Image: see text] ATP-dependent binding of the chaperonin GroEL to its cofactor GroES forms a cavity in which encapsulated substrate proteins can fold in isolation from bulk solution. It has been suggested that folding in the cavity may differ from that in bulk solution owing to steric confinement, interactions with the cavity walls, and differences between the properties of cavity-confined and bulk water. However, experimental data regarding the cavity-confined water are lacking. Here, we report measurements of water density and diffusion dynamics in the vicinity of a spin label attached to a cysteine in the Tyr71 → Cys GroES mutant obtained using two magnetic resonance techniques: electron-spin echo envelope modulation and Overhauser dynamic nuclear polarization. Residue 71 in GroES is fully exposed to bulk water in free GroES and to confined water within the cavity of the GroEL–GroES complex. Our data show that water density and translational dynamics in the vicinity of the label do not change upon complex formation, thus indicating that bulk water-exposed and cavity-confined GroES surface water share similar properties. Interestingly, the diffusion dynamics of water near the GroES surface are found to be unusually fast relative to other protein surfaces studied. The implications of these findings for chaperonin-assisted folding mechanisms are discussed. |
format | Online Article Text |
id | pubmed-4091268 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-40912682015-06-03 Probing Water Density and Dynamics in the Chaperonin GroEL Cavity Franck, John M. Sokolovski, Miri Kessler, Naama Matalon, Erez Gordon-Grossman, Michal Han, Song-i Goldfarb, Daniella Horovitz, Amnon J Am Chem Soc [Image: see text] ATP-dependent binding of the chaperonin GroEL to its cofactor GroES forms a cavity in which encapsulated substrate proteins can fold in isolation from bulk solution. It has been suggested that folding in the cavity may differ from that in bulk solution owing to steric confinement, interactions with the cavity walls, and differences between the properties of cavity-confined and bulk water. However, experimental data regarding the cavity-confined water are lacking. Here, we report measurements of water density and diffusion dynamics in the vicinity of a spin label attached to a cysteine in the Tyr71 → Cys GroES mutant obtained using two magnetic resonance techniques: electron-spin echo envelope modulation and Overhauser dynamic nuclear polarization. Residue 71 in GroES is fully exposed to bulk water in free GroES and to confined water within the cavity of the GroEL–GroES complex. Our data show that water density and translational dynamics in the vicinity of the label do not change upon complex formation, thus indicating that bulk water-exposed and cavity-confined GroES surface water share similar properties. Interestingly, the diffusion dynamics of water near the GroES surface are found to be unusually fast relative to other protein surfaces studied. The implications of these findings for chaperonin-assisted folding mechanisms are discussed. American Chemical Society 2014-06-03 2014-07-02 /pmc/articles/PMC4091268/ /pubmed/24888581 http://dx.doi.org/10.1021/ja503501x Text en Copyright © 2014 American Chemical Society Terms of Use (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) |
spellingShingle | Franck, John M. Sokolovski, Miri Kessler, Naama Matalon, Erez Gordon-Grossman, Michal Han, Song-i Goldfarb, Daniella Horovitz, Amnon Probing Water Density and Dynamics in the Chaperonin GroEL Cavity |
title | Probing
Water Density and Dynamics in the Chaperonin GroEL Cavity |
title_full | Probing
Water Density and Dynamics in the Chaperonin GroEL Cavity |
title_fullStr | Probing
Water Density and Dynamics in the Chaperonin GroEL Cavity |
title_full_unstemmed | Probing
Water Density and Dynamics in the Chaperonin GroEL Cavity |
title_short | Probing
Water Density and Dynamics in the Chaperonin GroEL Cavity |
title_sort | probing
water density and dynamics in the chaperonin groel cavity |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4091268/ https://www.ncbi.nlm.nih.gov/pubmed/24888581 http://dx.doi.org/10.1021/ja503501x |
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