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Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway
The U.S. Tox21 program has screened a library of approximately 10,000 (10K) environmental chemicals and drugs in three independent runs for estrogen receptor alpha (ERα) agonist and antagonist activity using two types of ER reporter gene cell lines, one with an endogenous full length ERα (ER-luc; BG...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4092345/ https://www.ncbi.nlm.nih.gov/pubmed/25012808 http://dx.doi.org/10.1038/srep05664 |
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author | Huang, Ruili Sakamuru, Srilatha Martin, Matt T. Reif, David M. Judson, Richard S. Houck, Keith A. Casey, Warren Hsieh, Jui-Hua Shockley, Keith R. Ceger, Patricia Fostel, Jennifer Witt, Kristine L. Tong, Weida Rotroff, Daniel M. Zhao, Tongan Shinn, Paul Simeonov, Anton Dix, David J. Austin, Christopher P. Kavlock, Robert J. Tice, Raymond R. Xia, Menghang |
author_facet | Huang, Ruili Sakamuru, Srilatha Martin, Matt T. Reif, David M. Judson, Richard S. Houck, Keith A. Casey, Warren Hsieh, Jui-Hua Shockley, Keith R. Ceger, Patricia Fostel, Jennifer Witt, Kristine L. Tong, Weida Rotroff, Daniel M. Zhao, Tongan Shinn, Paul Simeonov, Anton Dix, David J. Austin, Christopher P. Kavlock, Robert J. Tice, Raymond R. Xia, Menghang |
author_sort | Huang, Ruili |
collection | PubMed |
description | The U.S. Tox21 program has screened a library of approximately 10,000 (10K) environmental chemicals and drugs in three independent runs for estrogen receptor alpha (ERα) agonist and antagonist activity using two types of ER reporter gene cell lines, one with an endogenous full length ERα (ER-luc; BG1 cell line) and the other with a transfected partial receptor consisting of the ligand binding domain (ER-bla; ERα β-lactamase cell line), in a quantitative high-throughput screening (qHTS) format. The ability of the two assays to correctly identify ERα agonists and antagonists was evaluated using a set of 39 reference compounds with known ERα activity. Although both assays demonstrated adequate (i.e. >80%) predictivity, the ER-luc assay was more sensitive and the ER-bla assay more specific. The qHTS assay results were compared with results from previously published ERα binding assay data and showed >80% consistency. Actives identified from both the ER-bla and ER-luc assays were analyzed for structure-activity relationships (SARs) revealing known and potentially novel ERα active structure classes. The results demonstrate the feasibility of qHTS to identify environmental chemicals with the potential to interact with the ERα signaling pathway and the two different assay formats improve the confidence in correctly identifying these chemicals. |
format | Online Article Text |
id | pubmed-4092345 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-40923452014-07-11 Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway Huang, Ruili Sakamuru, Srilatha Martin, Matt T. Reif, David M. Judson, Richard S. Houck, Keith A. Casey, Warren Hsieh, Jui-Hua Shockley, Keith R. Ceger, Patricia Fostel, Jennifer Witt, Kristine L. Tong, Weida Rotroff, Daniel M. Zhao, Tongan Shinn, Paul Simeonov, Anton Dix, David J. Austin, Christopher P. Kavlock, Robert J. Tice, Raymond R. Xia, Menghang Sci Rep Article The U.S. Tox21 program has screened a library of approximately 10,000 (10K) environmental chemicals and drugs in three independent runs for estrogen receptor alpha (ERα) agonist and antagonist activity using two types of ER reporter gene cell lines, one with an endogenous full length ERα (ER-luc; BG1 cell line) and the other with a transfected partial receptor consisting of the ligand binding domain (ER-bla; ERα β-lactamase cell line), in a quantitative high-throughput screening (qHTS) format. The ability of the two assays to correctly identify ERα agonists and antagonists was evaluated using a set of 39 reference compounds with known ERα activity. Although both assays demonstrated adequate (i.e. >80%) predictivity, the ER-luc assay was more sensitive and the ER-bla assay more specific. The qHTS assay results were compared with results from previously published ERα binding assay data and showed >80% consistency. Actives identified from both the ER-bla and ER-luc assays were analyzed for structure-activity relationships (SARs) revealing known and potentially novel ERα active structure classes. The results demonstrate the feasibility of qHTS to identify environmental chemicals with the potential to interact with the ERα signaling pathway and the two different assay formats improve the confidence in correctly identifying these chemicals. Nature Publishing Group 2014-07-11 /pmc/articles/PMC4092345/ /pubmed/25012808 http://dx.doi.org/10.1038/srep05664 Text en Copyright © 2014, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder in order to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Huang, Ruili Sakamuru, Srilatha Martin, Matt T. Reif, David M. Judson, Richard S. Houck, Keith A. Casey, Warren Hsieh, Jui-Hua Shockley, Keith R. Ceger, Patricia Fostel, Jennifer Witt, Kristine L. Tong, Weida Rotroff, Daniel M. Zhao, Tongan Shinn, Paul Simeonov, Anton Dix, David J. Austin, Christopher P. Kavlock, Robert J. Tice, Raymond R. Xia, Menghang Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway |
title | Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway |
title_full | Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway |
title_fullStr | Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway |
title_full_unstemmed | Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway |
title_short | Profiling of the Tox21 10K compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway |
title_sort | profiling of the tox21 10k compound library for agonists and antagonists of the estrogen receptor alpha signaling pathway |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4092345/ https://www.ncbi.nlm.nih.gov/pubmed/25012808 http://dx.doi.org/10.1038/srep05664 |
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