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Polymorphism of NLRP3 Gene and Association with Susceptibility to Digestive Disorders in Rabbit
NLR family pyrin domain containing 3 (NLRP3) is a key component of the inflammasome, whose assembly is a crucial part of the innate immune response. The aim of the present study was to evaluate the association between exon 3 polymorphisms of NLRP3 and the susceptibility to digestive disorders in rab...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST)
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4093394/ https://www.ncbi.nlm.nih.gov/pubmed/25049809 http://dx.doi.org/10.5713/ajas.2012.12522 |
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author | Yang, Yu Zhang, Gong-Wei Chen, Shi-Yi Peng, Jin Lai, Song-Jia |
author_facet | Yang, Yu Zhang, Gong-Wei Chen, Shi-Yi Peng, Jin Lai, Song-Jia |
author_sort | Yang, Yu |
collection | PubMed |
description | NLR family pyrin domain containing 3 (NLRP3) is a key component of the inflammasome, whose assembly is a crucial part of the innate immune response. The aim of the present study was to evaluate the association between exon 3 polymorphisms of NLRP3 and the susceptibility to digestive disorders in rabbits. In total, five coding single-nucleotide polymorphisms (cSNPs) were identified; all of which are synonymous. Among them, c.456 C> and c.594 G> were further genotyped for association analysis based on case-control design (n =162 vs n =102). Meanwhile, growing rabbits were experimentally induced to digestive disorders by feeding a fiber-deficient diet, subsequently they were subjected to mRNA expression analysis. Association analysis revealed that haplotype H1 (the two cSNPs: GT) played a potential protective role against digestive disorders (p<0.001). The expression of NLRP3 in the group H1HX(1) (H1HX(1) is composed of H1H1, H1H3 and H1H4) was the lowest among four groups which were classified by different types of diplotypes. Those results suggested that the NLRP3 gene was significantly associated with susceptibility to digestive disorders in rabbit. |
format | Online Article Text |
id | pubmed-4093394 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST) |
record_format | MEDLINE/PubMed |
spelling | pubmed-40933942014-07-21 Polymorphism of NLRP3 Gene and Association with Susceptibility to Digestive Disorders in Rabbit Yang, Yu Zhang, Gong-Wei Chen, Shi-Yi Peng, Jin Lai, Song-Jia Asian-Australas J Anim Sci Article NLR family pyrin domain containing 3 (NLRP3) is a key component of the inflammasome, whose assembly is a crucial part of the innate immune response. The aim of the present study was to evaluate the association between exon 3 polymorphisms of NLRP3 and the susceptibility to digestive disorders in rabbits. In total, five coding single-nucleotide polymorphisms (cSNPs) were identified; all of which are synonymous. Among them, c.456 C> and c.594 G> were further genotyped for association analysis based on case-control design (n =162 vs n =102). Meanwhile, growing rabbits were experimentally induced to digestive disorders by feeding a fiber-deficient diet, subsequently they were subjected to mRNA expression analysis. Association analysis revealed that haplotype H1 (the two cSNPs: GT) played a potential protective role against digestive disorders (p<0.001). The expression of NLRP3 in the group H1HX(1) (H1HX(1) is composed of H1H1, H1H3 and H1H4) was the lowest among four groups which were classified by different types of diplotypes. Those results suggested that the NLRP3 gene was significantly associated with susceptibility to digestive disorders in rabbit. Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST) 2013-04 /pmc/articles/PMC4093394/ /pubmed/25049809 http://dx.doi.org/10.5713/ajas.2012.12522 Text en Copyright © 2013 by Asian-Australasian Journal of Animal Sciences This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License http://creativecommons.org/licenses/by-nc/3.0/ which permits unrestricted noncommercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Article Yang, Yu Zhang, Gong-Wei Chen, Shi-Yi Peng, Jin Lai, Song-Jia Polymorphism of NLRP3 Gene and Association with Susceptibility to Digestive Disorders in Rabbit |
title | Polymorphism of NLRP3 Gene and Association with Susceptibility to Digestive Disorders in Rabbit |
title_full | Polymorphism of NLRP3 Gene and Association with Susceptibility to Digestive Disorders in Rabbit |
title_fullStr | Polymorphism of NLRP3 Gene and Association with Susceptibility to Digestive Disorders in Rabbit |
title_full_unstemmed | Polymorphism of NLRP3 Gene and Association with Susceptibility to Digestive Disorders in Rabbit |
title_short | Polymorphism of NLRP3 Gene and Association with Susceptibility to Digestive Disorders in Rabbit |
title_sort | polymorphism of nlrp3 gene and association with susceptibility to digestive disorders in rabbit |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4093394/ https://www.ncbi.nlm.nih.gov/pubmed/25049809 http://dx.doi.org/10.5713/ajas.2012.12522 |
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