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A Graphic Method for Identification of Novel Glioma Related Genes

Glioma, as the most common and lethal intracranial tumor, is a serious disease that causes many deaths every year. Good comprehension of the mechanism underlying this disease is very helpful to design effective treatments. However, up to now, the knowledge of this disease is still limited. It is an...

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Autores principales: Gao, Yu-Fei, Shu, Yang, Yang, Lei, He, Yi-Chun, Li, Li-Peng, Huang, GuaHua, Li, Hai-Peng, Jiang, Yang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4094879/
https://www.ncbi.nlm.nih.gov/pubmed/25050377
http://dx.doi.org/10.1155/2014/891945
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author Gao, Yu-Fei
Shu, Yang
Yang, Lei
He, Yi-Chun
Li, Li-Peng
Huang, GuaHua
Li, Hai-Peng
Jiang, Yang
author_facet Gao, Yu-Fei
Shu, Yang
Yang, Lei
He, Yi-Chun
Li, Li-Peng
Huang, GuaHua
Li, Hai-Peng
Jiang, Yang
author_sort Gao, Yu-Fei
collection PubMed
description Glioma, as the most common and lethal intracranial tumor, is a serious disease that causes many deaths every year. Good comprehension of the mechanism underlying this disease is very helpful to design effective treatments. However, up to now, the knowledge of this disease is still limited. It is an important step to understand the mechanism underlying this disease by uncovering its related genes. In this study, a graphic method was proposed to identify novel glioma related genes based on known glioma related genes. A weighted graph was constructed according to the protein-protein interaction information retrieved from STRING and the well-known shortest path algorithm was employed to discover novel genes. The following analysis suggests that some of them are related to the biological process of glioma, proving that our method was effective in identifying novel glioma related genes. We hope that the proposed method would be applied to study other diseases and provide useful information to medical workers, thereby designing effective treatments of different diseases.
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spelling pubmed-40948792014-07-21 A Graphic Method for Identification of Novel Glioma Related Genes Gao, Yu-Fei Shu, Yang Yang, Lei He, Yi-Chun Li, Li-Peng Huang, GuaHua Li, Hai-Peng Jiang, Yang Biomed Res Int Research Article Glioma, as the most common and lethal intracranial tumor, is a serious disease that causes many deaths every year. Good comprehension of the mechanism underlying this disease is very helpful to design effective treatments. However, up to now, the knowledge of this disease is still limited. It is an important step to understand the mechanism underlying this disease by uncovering its related genes. In this study, a graphic method was proposed to identify novel glioma related genes based on known glioma related genes. A weighted graph was constructed according to the protein-protein interaction information retrieved from STRING and the well-known shortest path algorithm was employed to discover novel genes. The following analysis suggests that some of them are related to the biological process of glioma, proving that our method was effective in identifying novel glioma related genes. We hope that the proposed method would be applied to study other diseases and provide useful information to medical workers, thereby designing effective treatments of different diseases. Hindawi Publishing Corporation 2014 2014-06-23 /pmc/articles/PMC4094879/ /pubmed/25050377 http://dx.doi.org/10.1155/2014/891945 Text en Copyright © 2014 Yu-Fei Gao et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Gao, Yu-Fei
Shu, Yang
Yang, Lei
He, Yi-Chun
Li, Li-Peng
Huang, GuaHua
Li, Hai-Peng
Jiang, Yang
A Graphic Method for Identification of Novel Glioma Related Genes
title A Graphic Method for Identification of Novel Glioma Related Genes
title_full A Graphic Method for Identification of Novel Glioma Related Genes
title_fullStr A Graphic Method for Identification of Novel Glioma Related Genes
title_full_unstemmed A Graphic Method for Identification of Novel Glioma Related Genes
title_short A Graphic Method for Identification of Novel Glioma Related Genes
title_sort graphic method for identification of novel glioma related genes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4094879/
https://www.ncbi.nlm.nih.gov/pubmed/25050377
http://dx.doi.org/10.1155/2014/891945
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