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A Graphic Method for Identification of Novel Glioma Related Genes
Glioma, as the most common and lethal intracranial tumor, is a serious disease that causes many deaths every year. Good comprehension of the mechanism underlying this disease is very helpful to design effective treatments. However, up to now, the knowledge of this disease is still limited. It is an...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2014
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4094879/ https://www.ncbi.nlm.nih.gov/pubmed/25050377 http://dx.doi.org/10.1155/2014/891945 |
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author | Gao, Yu-Fei Shu, Yang Yang, Lei He, Yi-Chun Li, Li-Peng Huang, GuaHua Li, Hai-Peng Jiang, Yang |
author_facet | Gao, Yu-Fei Shu, Yang Yang, Lei He, Yi-Chun Li, Li-Peng Huang, GuaHua Li, Hai-Peng Jiang, Yang |
author_sort | Gao, Yu-Fei |
collection | PubMed |
description | Glioma, as the most common and lethal intracranial tumor, is a serious disease that causes many deaths every year. Good comprehension of the mechanism underlying this disease is very helpful to design effective treatments. However, up to now, the knowledge of this disease is still limited. It is an important step to understand the mechanism underlying this disease by uncovering its related genes. In this study, a graphic method was proposed to identify novel glioma related genes based on known glioma related genes. A weighted graph was constructed according to the protein-protein interaction information retrieved from STRING and the well-known shortest path algorithm was employed to discover novel genes. The following analysis suggests that some of them are related to the biological process of glioma, proving that our method was effective in identifying novel glioma related genes. We hope that the proposed method would be applied to study other diseases and provide useful information to medical workers, thereby designing effective treatments of different diseases. |
format | Online Article Text |
id | pubmed-4094879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2014 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-40948792014-07-21 A Graphic Method for Identification of Novel Glioma Related Genes Gao, Yu-Fei Shu, Yang Yang, Lei He, Yi-Chun Li, Li-Peng Huang, GuaHua Li, Hai-Peng Jiang, Yang Biomed Res Int Research Article Glioma, as the most common and lethal intracranial tumor, is a serious disease that causes many deaths every year. Good comprehension of the mechanism underlying this disease is very helpful to design effective treatments. However, up to now, the knowledge of this disease is still limited. It is an important step to understand the mechanism underlying this disease by uncovering its related genes. In this study, a graphic method was proposed to identify novel glioma related genes based on known glioma related genes. A weighted graph was constructed according to the protein-protein interaction information retrieved from STRING and the well-known shortest path algorithm was employed to discover novel genes. The following analysis suggests that some of them are related to the biological process of glioma, proving that our method was effective in identifying novel glioma related genes. We hope that the proposed method would be applied to study other diseases and provide useful information to medical workers, thereby designing effective treatments of different diseases. Hindawi Publishing Corporation 2014 2014-06-23 /pmc/articles/PMC4094879/ /pubmed/25050377 http://dx.doi.org/10.1155/2014/891945 Text en Copyright © 2014 Yu-Fei Gao et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Gao, Yu-Fei Shu, Yang Yang, Lei He, Yi-Chun Li, Li-Peng Huang, GuaHua Li, Hai-Peng Jiang, Yang A Graphic Method for Identification of Novel Glioma Related Genes |
title | A Graphic Method for Identification of Novel Glioma Related Genes |
title_full | A Graphic Method for Identification of Novel Glioma Related Genes |
title_fullStr | A Graphic Method for Identification of Novel Glioma Related Genes |
title_full_unstemmed | A Graphic Method for Identification of Novel Glioma Related Genes |
title_short | A Graphic Method for Identification of Novel Glioma Related Genes |
title_sort | graphic method for identification of novel glioma related genes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4094879/ https://www.ncbi.nlm.nih.gov/pubmed/25050377 http://dx.doi.org/10.1155/2014/891945 |
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