Cargando…

Large Scale Chemical Cross-linking Mass Spectrometry Perspectives

The spectacular heterogeneity of a complex protein mixture from biological samples becomes even more difficult to tackle when one’s attention is shifted towards different protein complex topologies, transient interactions, or localization of PPIs. Meticulous protein-by-protein affinity pull-downs an...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zybailov, Boris L., Glazko, Galina V., Jaiswal, Mihir, Raney, Kevin D.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	2013
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4101816/ https://www.ncbi.nlm.nih.gov/pubmed/25045217 http://dx.doi.org/10.4172/jpb.S2-001

Ejemplares similares

XLPM: efficient algorithm for the analysis of protein-protein contacts using chemical cross-linking mass spectrometry
por: Jaiswal, Mihir, et al.
Publicado: (2014)

Computational Prediction of Polycomb-Associated Long Non-Coding RNAs
por: Glazko, Galina V., et al.
Publicado: (2012)

GSAR: Bioconductor package for Gene Set analysis in R
por: Rahmatallah, Yasir, et al.
Publicado: (2017)

Proteome-transcriptome alignment of molecular portraits achieved by self-contained gene set analysis: Consensus colon cancer subtypes case study
por: Glazko, Galina, et al.
Publicado: (2019)

Oligomerisation of Synaptobrevin-2 Studied by Native Mass Spectrometry and Chemical Cross-Linking
por: Wittig, Sabine, et al.
Publicado: (2018)

Milk Formula Diet Alters Bacterial and Host Protein Profile in Comparison to Human Milk Diet in Neonatal Piglet Model
por: Rosa, Fernanda, et al.
Publicado: (2021)

Probing Native Protein Structures by Chemical Cross-linking, Mass Spectrometry, and Bioinformatics
por: Leitner, Alexander, et al.
Publicado: (2010)

ComMap: a software to perform large-scale structure-based mapping for cross-linking mass spectrometry
por: Zhang, Weijie, et al.
Publicado: (2023)

Cross-linking/mass spectrometry at the crossroads
por: Piersimoni, Lolita, et al.
Publicado: (2020)

Resistant starch slows the progression of CKD in the 5/6 nephrectomy mouse model
por: Karaduta, Oleg, et al.
Publicado: (2020)

Structure of the ribosome post-recycling complex probed by chemical cross-linking and mass spectrometry
por: Kiosze-Becker, Kristin, et al.
Publicado: (2016)

Cross-Linking Mass Spectrometry on P-Glycoprotein
por: Gellen, Gabriella, et al.
Publicado: (2023)

Visualizing the Ensemble Structures of Protein Complexes Using Chemical Cross-Linking Coupled with Mass Spectrometry
por: Gong, Zhou, et al.
Publicado: (2015)

Selective cross‐linking of coinciding protein assemblies by in‐gel cross‐linking mass spectrometry
por: Hevler, Johannes F, et al.
Publicado: (2021)

Leukocytosis and Expression of Bovine Leukemia Virus microRNAs in Cattle
por: Kosovsky, Gleb Yu., et al.
Publicado: (2020)

Status of Large-scale Analysis of Post-translational Modifications by Mass Spectrometry
por: Olsen, Jesper V., et al.
Publicado: (2013)

Quirks of Error Estimation in Cross-Linking/Mass Spectrometry
por: Fischer, Lutz, et al.
Publicado: (2017)

Complementary Benzophenone Cross-Linking/Mass Spectrometry Photochemistry
por: Belsom, Adam, et al.
Publicado: (2017)

CLPM: A Cross-Linked Peptide Mapping Algorithm for Mass Spectrometric Analysis
por: Tang, Yong, et al.
Publicado: (2005)

Large-scale mapping of human protein–protein interactions by mass spectrometry
por: Ewing, Rob M, et al.
Publicado: (2007)

Ensuring the statistical soundness of competitive gene set approaches: gene filtering and genome-scale coverage are essential
por: Tripathi, Shailesh, et al.
Publicado: (2013)

On the Reproducibility of Label-Free Quantitative Cross-Linking/Mass Spectrometry
por: Müller, Fränze, et al.
Publicado: (2017)

Sequential Digestion with Trypsin and Elastase in Cross-Linking Mass Spectrometry
por: Dau, Therese, et al.
Publicado: (2019)

Analysis of the Dynamic Proteasome Structure by Cross-Linking Mass Spectrometry
por: Mendes, Marta L., et al.
Publicado: (2021)

BASIS: High-performance bioinformatics platform for processing of large-scale mass spectrometry imaging data in chemically augmented histology
por: Veselkov, Kirill, et al.
Publicado: (2018)

Large-scale parallelization of nanomechanical mass spectrometry with weakly-coupled resonators
por: Stassi, Stefano, et al.
Publicado: (2019)

Joining Forces: Integrating Proteomics and Cross-linking with the Mass Spectrometry of Intact Complexes
por: Stengel, Florian, et al.
Publicado: (2012)

Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers()
por: Fischer, Lutz, et al.
Publicado: (2013)

Combining Chemical Cross-linking and Mass Spectrometry of Intact Protein Complexes to Study the Architecture of Multi-subunit Protein Assemblies
por: Haupt, Caroline, et al.
Publicado: (2017)

A General Method for Targeted Quantitative Cross-Linking Mass Spectrometry
por: Chavez, Juan D., et al.
Publicado: (2016)

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study
por: Iacobucci, Claudio, et al.
Publicado: (2019)

Data-independent Acquisition Improves Quantitative Cross-linking Mass Spectrometry
por: Müller, Fränze, et al.
Publicado: (2019)

Mass spectrometry reveals the chemistry of formaldehyde cross-linking in structured proteins
por: Tayri-Wilk, Tamar, et al.
Publicado: (2020)

Cross-linking mass spectrometry for mapping protein complex topologies in situ
por: Lee, Kitaik, et al.
Publicado: (2023)

Two-dimensional mass spectrometry: new perspectives for tandem mass spectrometry
por: van Agthoven, Maria A., et al.
Publicado: (2019)

Large-Scale Analysis of Apolipoprotein CIII Glycosylation by Ultrahigh Resolution Mass Spectrometry
por: Demus, Daniel, et al.
Publicado: (2021)

Cross-Linking Electrochemical Mass Spectrometry for Probing Protein Three-Dimensional Structures
por: Zheng, Qiuling, et al.
Publicado: (2014)

Quantitative cross-linking/mass spectrometry reveals subtle protein conformational changes
por: Chen, Zhuo, et al.
Publicado: (2016)

Blind testing of cross‐linking/mass spectrometry hybrid methods in CASP11
por: Schneider, Michael, et al.
Publicado: (2016)

Facilitating identification of minimal protein binding domains by cross-linking mass spectrometry
por: Liu, Qingyang, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_45u7aev4mhpjo079m2ivtu0o5u