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eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses

Venn diagrams with three curves are used extensively in various medical and scientific disciplines to visualize relationships between data sets and facilitate data analysis. The area of the regions formed by the overlapping curves is often directly proportional to the cardinality of the depicted set...

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Detalles Bibliográficos
Autores principales: Micallef, Luana, Rodgers, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4102485/
https://www.ncbi.nlm.nih.gov/pubmed/25032825
http://dx.doi.org/10.1371/journal.pone.0101717
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author Micallef, Luana
Rodgers, Peter
author_facet Micallef, Luana
Rodgers, Peter
author_sort Micallef, Luana
collection PubMed
description Venn diagrams with three curves are used extensively in various medical and scientific disciplines to visualize relationships between data sets and facilitate data analysis. The area of the regions formed by the overlapping curves is often directly proportional to the cardinality of the depicted set relation or any other related quantitative data. Drawing these diagrams manually is difficult and current automatic drawing methods do not always produce appropriate diagrams. Most methods depict the data sets as circles, as they perceptually pop out as complete distinct objects due to their smoothness and regularity. However, circles cannot draw accurate diagrams for most 3-set data and so the generated diagrams often have misleading region areas. Other methods use polygons to draw accurate diagrams. However, polygons are non-smooth and non-symmetric, so the curves are not easily distinguishable and the diagrams are difficult to comprehend. Ellipses are more flexible than circles and are similarly smooth, but none of the current automatic drawing methods use ellipses. We present eulerAPE as the first method and software that uses ellipses for automatically drawing accurate area-proportional Venn diagrams for 3-set data. We describe the drawing method adopted by eulerAPE and we discuss our evaluation of the effectiveness of eulerAPE and ellipses for drawing random 3-set data. We compare eulerAPE and various other methods that are currently available and we discuss differences between their generated diagrams in terms of accuracy and ease of understanding for real world data.
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spelling pubmed-41024852014-07-21 eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses Micallef, Luana Rodgers, Peter PLoS One Research Article Venn diagrams with three curves are used extensively in various medical and scientific disciplines to visualize relationships between data sets and facilitate data analysis. The area of the regions formed by the overlapping curves is often directly proportional to the cardinality of the depicted set relation or any other related quantitative data. Drawing these diagrams manually is difficult and current automatic drawing methods do not always produce appropriate diagrams. Most methods depict the data sets as circles, as they perceptually pop out as complete distinct objects due to their smoothness and regularity. However, circles cannot draw accurate diagrams for most 3-set data and so the generated diagrams often have misleading region areas. Other methods use polygons to draw accurate diagrams. However, polygons are non-smooth and non-symmetric, so the curves are not easily distinguishable and the diagrams are difficult to comprehend. Ellipses are more flexible than circles and are similarly smooth, but none of the current automatic drawing methods use ellipses. We present eulerAPE as the first method and software that uses ellipses for automatically drawing accurate area-proportional Venn diagrams for 3-set data. We describe the drawing method adopted by eulerAPE and we discuss our evaluation of the effectiveness of eulerAPE and ellipses for drawing random 3-set data. We compare eulerAPE and various other methods that are currently available and we discuss differences between their generated diagrams in terms of accuracy and ease of understanding for real world data. Public Library of Science 2014-07-17 /pmc/articles/PMC4102485/ /pubmed/25032825 http://dx.doi.org/10.1371/journal.pone.0101717 Text en © 2014 Micallef, Rodgers http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Micallef, Luana
Rodgers, Peter
eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses
title eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses
title_full eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses
title_fullStr eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses
title_full_unstemmed eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses
title_short eulerAPE: Drawing Area-Proportional 3-Venn Diagrams Using Ellipses
title_sort eulerape: drawing area-proportional 3-venn diagrams using ellipses
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4102485/
https://www.ncbi.nlm.nih.gov/pubmed/25032825
http://dx.doi.org/10.1371/journal.pone.0101717
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