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Mitochondrial microsatellite markers for the Australian ectomycorrhizal fungus Laccaria sp. A (Hydnangiaceae)(1)

• Premise of the study: Microsatellite loci were developed for the ectomycorrhizal fungus Laccaria sp. A to investigate the population genetic structure of this fungal symbiont across its fragmented distribution in southeastern Australia. • Methods and Results: A partial genome sequence from an indi...

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Autores principales: Sheedy, Elizabeth M., Van de Wouw, Angela P., Howlett, Barbara J., May, Tom W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Botanical Society of America 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103105/
https://www.ncbi.nlm.nih.gov/pubmed/25202611
http://dx.doi.org/10.3732/apps.1300086
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author Sheedy, Elizabeth M.
Van de Wouw, Angela P.
Howlett, Barbara J.
May, Tom W.
author_facet Sheedy, Elizabeth M.
Van de Wouw, Angela P.
Howlett, Barbara J.
May, Tom W.
author_sort Sheedy, Elizabeth M.
collection PubMed
description • Premise of the study: Microsatellite loci were developed for the ectomycorrhizal fungus Laccaria sp. A to investigate the population genetic structure of this fungal symbiont across its fragmented distribution in southeastern Australia. • Methods and Results: A partial genome sequence from an individual collection of Laccaria sp. A was obtained by 454 genome sequencing. Eight microsatellite markers were selected from 66 loci identified in the genome. The selected markers were highly polymorphic (4–19 alleles per locus, average 13 alleles) and amplified reproducibly from collections made across the distribution of this species. Five of these markers also amplified reproducibly in the sister species Laccaria sp. E (1). All eight of the selected microsatellite loci were from the mitochondrial genome. • Conclusions: The highly polymorphic markers described here will enable population structure of Laccaria sp. A to be determined, contributing to research on mycorrhizal fungi from a novel distribution.
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spelling pubmed-41031052014-09-08 Mitochondrial microsatellite markers for the Australian ectomycorrhizal fungus Laccaria sp. A (Hydnangiaceae)(1) Sheedy, Elizabeth M. Van de Wouw, Angela P. Howlett, Barbara J. May, Tom W. Appl Plant Sci Primer Note • Premise of the study: Microsatellite loci were developed for the ectomycorrhizal fungus Laccaria sp. A to investigate the population genetic structure of this fungal symbiont across its fragmented distribution in southeastern Australia. • Methods and Results: A partial genome sequence from an individual collection of Laccaria sp. A was obtained by 454 genome sequencing. Eight microsatellite markers were selected from 66 loci identified in the genome. The selected markers were highly polymorphic (4–19 alleles per locus, average 13 alleles) and amplified reproducibly from collections made across the distribution of this species. Five of these markers also amplified reproducibly in the sister species Laccaria sp. E (1). All eight of the selected microsatellite loci were from the mitochondrial genome. • Conclusions: The highly polymorphic markers described here will enable population structure of Laccaria sp. A to be determined, contributing to research on mycorrhizal fungi from a novel distribution. Botanical Society of America 2014-02-11 /pmc/articles/PMC4103105/ /pubmed/25202611 http://dx.doi.org/10.3732/apps.1300086 Text en © 2014 Sheedy et al. Published by the Botanical Society of America http://creativecommons.org/licenses/by-nc/4.0/ This work is licensed under a Creative Commons Attribution License (CC-BY-NC-SA).
spellingShingle Primer Note
Sheedy, Elizabeth M.
Van de Wouw, Angela P.
Howlett, Barbara J.
May, Tom W.
Mitochondrial microsatellite markers for the Australian ectomycorrhizal fungus Laccaria sp. A (Hydnangiaceae)(1)
title Mitochondrial microsatellite markers for the Australian ectomycorrhizal fungus Laccaria sp. A (Hydnangiaceae)(1)
title_full Mitochondrial microsatellite markers for the Australian ectomycorrhizal fungus Laccaria sp. A (Hydnangiaceae)(1)
title_fullStr Mitochondrial microsatellite markers for the Australian ectomycorrhizal fungus Laccaria sp. A (Hydnangiaceae)(1)
title_full_unstemmed Mitochondrial microsatellite markers for the Australian ectomycorrhizal fungus Laccaria sp. A (Hydnangiaceae)(1)
title_short Mitochondrial microsatellite markers for the Australian ectomycorrhizal fungus Laccaria sp. A (Hydnangiaceae)(1)
title_sort mitochondrial microsatellite markers for the australian ectomycorrhizal fungus laccaria sp. a (hydnangiaceae)(1)
topic Primer Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4103105/
https://www.ncbi.nlm.nih.gov/pubmed/25202611
http://dx.doi.org/10.3732/apps.1300086
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